Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02773 ATGCCACCCTTTTGTCCATCTTCACTGAACCTCAACACAGGAACACTTGAGGATGGACGTGGTGAGATTACAGTACGGTGCTTTAAAGAAGACAAGCGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCATAAATTACTTGCCTCCCAAGAATATTGTGTCAATTTATGGGTGTAGTTCTCATCACGAGGAACCTCTACTAGTGCAAGAATACCTATCCAATGGAAATCTTGCTGCTCATTTTCAAAGTAACATTTTACTACCTTGGCATAAACGACTGGATATAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTATTACGGCATCATCCACCGGAATGTGAAGTCCAGCAATATTCTCCTACATGAGAACTTTTCTGCTAAAGTTGGTAGAGTAGGTTCAAGTGGTTATATAGACCCAGAGTATTTGACAAAAGGCCAGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCACAGCTGGCAAAAAATTGGGTTCTGAATGAAGAGGAAAATCTTGCTACCCTTTTAAGCAGAAAAATTGAAAAACCAATCTTTGGTGGAGCTTTTGGATCCAAGACTTGGGTCCCAATCAAACCTTATGATCAAGCAGGTGATGACTGCTACAGCTGA 669 0.3976 MPPFCPSSLNLNTGTLEDGRGEITVRCFKEDKRYILQQFINETVIINYLPPKNIVSIYGCSSHHEEPLLVQEYLSNGNLAAHFQSNILLPWHKRLDIAIDIANALDYLHYYGIIHRNVKSSNILLHENFSAKVGRVGSSGYIDPEYLTKGQLSVKNDVYSFGVVLCELLSSQLAKNWVLNEEENLATLLSRKIEKPIFGGAFGSKTWVPIKPYDQAGDDCYS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02773 222 Pfam Protein kinase domain 33 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02773 222 Gene3D Phosphorylase Kinase; domain 1 10 77 - -
Spst4g02773 222 SUPERFAMILY Protein kinase-like (PK-like) 18 172 IPR011009 -
Spst4g02773 222 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02773 222 Gene3D Transferase(Phosphotransferase) domain 1 78 206 - -
Spst4g02773 222 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 195 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02773 Spst-Chr4 67534921 67536940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02773 14 194 Receptor kinase-like Gene Family AT1G25390 43.204 2.67e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst4g02773 Pkinase 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02773 - - vra:106773095 279.641