Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02772 ATGCTAGTGTACGAGTACATCTCCAATGGAACTCTTTCTAAACATCTTCATGAATCTTCCAGCAAACTACCATGGCATACTAGATTGAACATTGCCATCGAAACTGCAAGACTCAGGCATCATCCACCGGGATACCATGTTACTCATGTTACAACTATTCCACTAGGAACTCGTGCTTACATAGATCCTGACTACTACTTATCTGGAAAGGTCAGTAACAAAAGTGATGTCTACAGTTTTGGAGTGGTCTTGCTTGAATTCATTGTTAGCAGTGGCAGAGTTAGCATTTCCGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGAGACCCTGGAGGGCATAAGGAAAGGAAAATGGGGATTCAACCAGATAACATAGTCTTTATTCATACTGCAGATAAATTCTTATATGATTTCTGA 435 0.4138 MLVYEYISNGTLSKHLHESSSKLPWHTRLNIAIETARLRHHPPGYHVTHVTTIPLGTRAYIDPDYYLSGKVSNKSDVYSFGVVLLEFIVSSGRVSISVCAVSQGTQTIHETGARDPGGHKERKMGIQPDNIVFIHTADKFLYDF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02772 144 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 46 97 IPR044652 GO:0004672
Spst4g02772 144 SUPERFAMILY Protein kinase-like (PK-like) 1 89 IPR011009 -
Spst4g02772 144 Gene3D Transferase(Phosphotransferase) domain 1 1 39 - -
Spst4g02772 144 Gene3D Transferase(Phosphotransferase) domain 1 40 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02772 Spst-Chr4 67529104 67534445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02772 1 88 Receptor kinase-like Gene Family AT2G23450 38.400 3.13e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst4g02772 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02772 - - vra:106773095 123.635