Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02771 ATGCCTCATCCTCTTGTTCCACCTCCTTCTTCCCTCATAAACACCCTTTTCTTCTTCTCACTCTTCTTCCCAACATCTATATCTAGTGATGCTGAAGGGTACACAGCATGTGAACCTTTTAGCTGTGGGAAATTCGACAATATTAGGTACCCATTTTGGAGTAAGGACCAACAAGATTATTGTGGGCATCCAAAGTTCATGCTTGATTGCCAACAAGACAACGTGACCATTGACATCATGTCACAGACATTCCAAGTCATTGATATGGATCAGATATCTAAGGTTTTGAAGATTGCAAGCAACACTTCCAATGATGTTGAGTACACTTTGTTATATGACTGTGGCCCTCTTGGATATGCGTCTAGTAGTGTGAATATTGAAGGAGCAATACAATTTAATTGCCGCATAGGTGGTGATCTTCAAGCTGGATTCTTTGTGTTGAGTACTGATGTGGTTAATTTCAATAGTCTGAGTTGCAAGAATAGCATCACTGTTTATGTCCTAAAAGAGGCTGTGAAGAATGATTCGGTTGTGGACAATGTTTTAGGAAGAGAATTTGAGGTTGGATGGAGTGGTGTTAATGAAGATCAATGTAATGGTTGCTCAAAATCTGGTGGGAGATGTGGACACAATGCATCTGTGGATGCGTTTACGTGTCTCTGTCCTAATCAGCAGTCTGATGGTGAGGTTTGTAGCAAAATCCTGGCAAGTTCTTCATATGCTCCTAATGTAGAGAAGATGATAGTCATTAGTGATGGTCATGAATACAAGCGTTTTGTTTTCCATCCTCGTATTGCATGTGGAGCAATGGGAGTCTTCATGATGTGCATCATAATATGCTGTAGTAAATGTATGTCATCAAAAAGAAAGGTAATATTTAGGATGACAAACGACCAAGATATTGAGGTATTCTTAAAAAATCATGGGACTCTAGCACAAAAGATATATAAATTTTCAGAAGTGAAGAAAATGACCAACAACTTCTCAGTTAAACTGGGTGAAGGTGGTTTTGGTGTTGTCTACAAAGGAGAGATACTCAATGGTTATCCTGTGGCGGTAAAGATATTAAGTGCATCAAAAGGAAATGGCCAAGAATTTATCAATGAGGTTGCCAGCATCAGTAGGACTTCTCATGTTAATGTTGTCCAACTTCTTGGATTCTGTTTGGAAGGAAAGACGAAAGCTCTGATTTATGAATACATGGCTAACGGTTCTCTCGATAAGTTCATTAGTAATAAGGGATTCGAAAGCACTCCATCTTTGAGCTGGGATAATTTGTTGCAAATTGCCAAAGGGATAGCCCAAGGACTAGATTACTTGCACAAGGGATGCAACACTCGAATTTTTCATTTTGACATAAAACCACATAACATTCTTTTGGATGAGGACTTATGTCCCAAGATATCAGATTTTGGGCTTGCAAAACTTTGTCCTGCCAAAGAAAGCACTATTCTCATGTCAGATGCTAGAGGAACAATAGGATACGTAGCTCCAGAAGTGTTTAACAAACATTTTGGTGGAGTTTCTCAGAAGTCTGACGTCTACAGTTATGGAATGATGCTACTAGAAATGGTGGGAGTGAGGAACAATATTAATTTAGAAGCTACTGAAACAAGTGAGTACTTCCCAGATTGGATATACCGCAAGTTAGAGCAAGGGGAAGATTCGAGAACTGACGGGGTGATAGACACAGAAGATAAAGAGATAGAAAGGAGAATGATTGTAGTTAGTTTATGGTGCATTCAAACGTTTCCAAAGGACAGACCTACCATGAGTAAAGTAATAGATATGCTAGAAGGCAACATGAATTCCCAAGAAATGCCCCCAAAACCCTTGCTTTCTTCTCCCACTACTAGATCGGTGCCAGAATGGACCACTAGTTCTTTGCAGTCTGTGTAG 1899 0.396 MPHPLVPPPSSLINTLFFFSLFFPTSISSDAEGYTACEPFSCGKFDNIRYPFWSKDQQDYCGHPKFMLDCQQDNVTIDIMSQTFQVIDMDQISKVLKIASNTSNDVEYTLLYDCGPLGYASSSVNIEGAIQFNCRIGGDLQAGFFVLSTDVVNFNSLSCKNSITVYVLKEAVKNDSVVDNVLGREFEVGWSGVNEDQCNGCSKSGGRCGHNASVDAFTCLCPNQQSDGEVCSKILASSSYAPNVEKMIVISDGHEYKRFVFHPRIACGAMGVFMMCIIICCSKCMSSKRKVIFRMTNDQDIEVFLKNHGTLAQKIYKFSEVKKMTNNFSVKLGEGGFGVVYKGEILNGYPVAVKILSASKGNGQEFINEVASISRTSHVNVVQLLGFCLEGKTKALIYEYMANGSLDKFISNKGFESTPSLSWDNLLQIAKGIAQGLDYLHKGCNTRIFHFDIKPHNILLDEDLCPKISDFGLAKLCPAKESTILMSDARGTIGYVAPEVFNKHFGGVSQKSDVYSYGMMLLEMVGVRNNINLEATETSEYFPDWIYRKLEQGEDSRTDGVIDTEDKEIERRMIVVSLWCIQTFPKDRPTMSKVIDMLEGNMNSQEMPPKPLLSSPTTRSVPEWTTSSLQSV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02771 632 MobiDBLite consensus disorder prediction 602 632 - -
Spst4g02771 632 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 615 IPR045874 GO:0004672
Spst4g02771 632 FunFam PR5-like receptor kinase 401 610 - -
Spst4g02771 632 ProSiteProfiles Protein kinase domain profile. 326 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02771 632 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02771 632 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Spst4g02771 632 Pfam Protein kinase domain 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02771 632 Gene3D Phosphorylase Kinase; domain 1 299 400 - -
Spst4g02771 632 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Spst4g02771 632 FunFam serine/threonine-protein kinase PBS1-like 295 400 - -
Spst4g02771 632 SUPERFAMILY Protein kinase-like (PK-like) 310 599 IPR011009 -
Spst4g02771 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Spst4g02771 632 Pfam Wall-associated receptor kinase galacturonan-binding 37 99 IPR025287 GO:0030247
Spst4g02771 632 Pfam Wall-associated receptor kinase C-terminal 157 223 IPR032872 -
Spst4g02771 632 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02771 Spst-Chr4 67494751 67498767 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02771 10 611 Receptor kinase-like Gene Family AT5G38260 38.889 2.29e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02771 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02771 - - gmx:102665158 814.683