Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02768 ATGACCAACAACTTCTCAGTTAAACTGGGTGAAGGTGGTTTTGGTGTTGTGTACAAAGGGGAGATACTCAATGGTAATCCTGTAGTGGTAAAGATTTTAAATGCATCGAAAGGAAATGGCAAAGACTTTATCAATGAGGTTGCCAGCATCAGTAGAACTTCTCATGTTAATGTTGTCCAACTTCTTGGATTCTGTTTGGAAGGAAACAAGAAAGCTCTTATTTATGAATACATGGCTAATGGTTCCCTCGATAAGTTCATTAGTAAGAAGGGATTCGAAAGAACACCATCCTTGAGCTGGGATAATTTATTGCAAATTGCTAAAGGGATAGCACAAGGACTAGATTACTTGCACAAGGGATGCAACACTAGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAGGACTTATGTCCCAAGATATCAGATTTTGGGCTTGCTAAATTTTGTCATCCCAAAGAAAGCACTATTCTCATGTCAGATGCTAGAGGAACCATAGGATACGTAGCTCCAGAAGTGTGCAACAAACATTTTGGTGGAGTTTCACACAAATCTGACGTATACAGTTATGGAATGATGCTACTAGAAATGGTGGGAGTGAGGAAAAATATTAATGTAGACGCTACTGAAACAAGTGAGTACTTCCCAGATTGGATATACCGAAGGTTAGAGCAAGAGGAAGATTTGAGAACTGACGGGGTGATAGACACAGAAGAGAAAGAGATAGAAAGGAGAATGATTGTAGTTAGTTTATGGTGCATTCAAACGTTTCCAAAGGATAGACCTACTATGAGTAGAGTAATAGATATGCTTGAAGGCAACATGAATTCCCAAGAAATGCCCCCAAAACCTTTTCTTTCTTCTCCCCCCACTATATCGGAGTCAGAATGGACCCGTAGTTCTTTGGAGTCTGTGTAG 930 0.3914 MTNNFSVKLGEGGFGVVYKGEILNGNPVVVKILNASKGNGKDFINEVASISRTSHVNVVQLLGFCLEGNKKALIYEYMANGSLDKFISKKGFERTPSLSWDNLLQIAKGIAQGLDYLHKGCNTRILHFDIKPHNILLDEDLCPKISDFGLAKFCHPKESTILMSDARGTIGYVAPEVCNKHFGGVSHKSDVYSYGMMLLEMVGVRKNINVDATETSEYFPDWIYRRLEQEEDLRTDGVIDTEEKEIERRMIVVSLWCIQTFPKDRPTMSRVIDMLEGNMNSQEMPPKPFLSSPPTISESEWTRSSLESV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02768 309 MobiDBLite consensus disorder prediction 293 309 - -
Spst4g02768 309 FunFam PR5-like receptor kinase 78 287 - -
Spst4g02768 309 ProSiteProfiles Protein kinase domain profile. 3 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02768 309 MobiDBLite consensus disorder prediction 280 309 - -
Spst4g02768 309 Pfam Protein kinase domain 7 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02768 309 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Spst4g02768 309 Gene3D Transferase(Phosphotransferase) domain 1 78 287 - -
Spst4g02768 309 SUPERFAMILY Protein kinase-like (PK-like) 7 276 IPR011009 -
Spst4g02768 309 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 295 IPR045874 GO:0004672
Spst4g02768 309 PIRSF ILK 3 284 - -
Spst4g02768 309 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Spst4g02768 309 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02768 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02768 Spst-Chr4 67475861 67476790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02768 1 300 Receptor kinase-like Gene Family AT1G66910 54.605 4.12e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02768 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02768 - - vun:114181925 531.561