Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02765 ATGAAAGTGATGCTAACACACCCTGTCAAGGATGTTTGTTCTCCGGAATTTGTTCCCACTTACCAGATTTTGAATAACACTCTGTTCCAGTATTCCGCGTCTGTGGACAACATCACCATATTCTTCGATGGTTGTCCTGATAACATCCTAGGTTTCCCTTCAAACCGCAACTTTAAGTGCGGGGATGATGTGCATTATTTTGAGGAGGGAGACAATGAGGAAGAGATGCTCCAGAAACATTCAAAGCTTAGGGATTGCAAGCAACGTTTGCTAGTGCCCACTGCCGCTCCTCTCGATCATTATAATTATATTTATGGAGATGAAGTTGTGAGAGAAGCTATCAGTGATGGGTTTGAGGTGTACTATGATGTTCCTCAACATTGCAAACGATGCAACGAAACGGACGGAAGTTGCTGGAACGGTGGTATTGGTGAATATGTAGTTTCATGCAAGTATTGCTCAAATGAACACTGTTCTTCTCCTCCCGGAAAAAGTACATCTAACCTTATCAGGAAAATCATCATAGGTGTTGCAAGTGCAGCAATGGGAGTCTTCATGATGTGCATCATAATATGCTGTAGTAAATGTATGTCATCAAAAAGAAAGGTAATATTTTGGATGACAAACGACCAAGATATTGAGGTATTCTTAAAAAATCATGGGACTCTAGCACAAAAGATATATAAATTTTCAGAAGTGAAGAAAATGACCAACAACTTCTCAGTTAAACTGGGTGAAGGTGGTTTTGGTGTTGTCTACAAAGGAGAGATACTCAATGGTTATCCTGTGGCGGTAAAGATATTAAGTGCATCAAAAGGAAATGGCCAAGAATTTATCAATGAGGTTGCCAGCATCAGTAGGACTTCTCATGTTAATGTTGTCCAACTTCTTGGATTCTGTTTGGAAGGAAAGACGAAAGCTCTGATTTATGAATACATGGCTAATGGTTCTCTCGATAAGTTCATTAGTAATAAGGGATTCGAAAGCACTCCATCTTTGAGCTGGGATAATTTGTTGCAAATTGCCAAAGGGATAGCCCAAGGACTAGATTACTTGCACAAGGGATGCAACACTCGAATTTTTCATTTTGACATAAAACCACATAACATTCTTTTGGATGAGGACTTATGTCCCAAGATATCAGATTTTGGGCTTGCAAAACTTTGTCCTGCCAAAGAAAGCACTATTCTCATGTCAGATGCTAGAGGAACAATAGGATACGTAGCTCCAGAAGTGTTTAACAAACATTTTGGTGGAGTTTCTCAGAAGTCTGACGTCTACAGTTATGGAATGATGCTACTAGAAATGGTGGGAGCGAGGAACAATATTAATTTAGAAGCTACTGAAACAAGTGAGTACTTCCCAGATTGGATATACCGCAAGTTAGAGCAAGGGGAAGATTTGAGAACTGACGGGGTGATAGACACAGAAGAGAAAGAGATAGAAAGGAGAATGATTGTAGTTAGTTTATGGTGCATTCAAACGTTTCCAAAGGATAGACCTACCATGAGTAGAGTAATAGATATGCTAGAAGGCAACATGAATTCCCAAGAAATGCCCCCAAAACCCTTGCTTTCTTCTCCCACTACTAGATCGGTGCCAGAATGGACCACTAGTTCTTTGCAGTCTGTGTAG 1635 0.4012 MKVMLTHPVKDVCSPEFVPTYQILNNTLFQYSASVDNITIFFDGCPDNILGFPSNRNFKCGDDVHYFEEGDNEEEMLQKHSKLRDCKQRLLVPTAAPLDHYNYIYGDEVVREAISDGFEVYYDVPQHCKRCNETDGSCWNGGIGEYVVSCKYCSNEHCSSPPGKSTSNLIRKIIIGVASAAMGVFMMCIIICCSKCMSSKRKVIFWMTNDQDIEVFLKNHGTLAQKIYKFSEVKKMTNNFSVKLGEGGFGVVYKGEILNGYPVAVKILSASKGNGQEFINEVASISRTSHVNVVQLLGFCLEGKTKALIYEYMANGSLDKFISNKGFESTPSLSWDNLLQIAKGIAQGLDYLHKGCNTRIFHFDIKPHNILLDEDLCPKISDFGLAKLCPAKESTILMSDARGTIGYVAPEVFNKHFGGVSQKSDVYSYGMMLLEMVGARNNINLEATETSEYFPDWIYRKLEQGEDLRTDGVIDTEEKEIERRMIVVSLWCIQTFPKDRPTMSRVIDMLEGNMNSQEMPPKPLLSSPTTRSVPEWTTSSLQSV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02765 544 Pfam Protein tyrosine and serine/threonine kinase 241 510 IPR001245 GO:0004672|GO:0006468
Spst4g02765 544 PANTHER RUST RESISTANCE KINASE LR10-RELATED 207 527 IPR045874 GO:0004672
Spst4g02765 544 SMART serkin_6 238 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02765 544 Pfam Wall-associated receptor kinase C-terminal 71 140 IPR032872 -
Spst4g02765 544 Gene3D Phosphorylase Kinase; domain 1 212 312 - -
Spst4g02765 544 Gene3D Transferase(Phosphotransferase) domain 1 313 522 - -
Spst4g02765 544 SUPERFAMILY Protein kinase-like (PK-like) 223 511 IPR011009 -
Spst4g02765 544 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Spst4g02765 544 MobiDBLite consensus disorder prediction 519 544 - -
Spst4g02765 544 MobiDBLite consensus disorder prediction 514 544 - -
Spst4g02765 544 FunFam PR5-like receptor kinase 313 522 - -
Spst4g02765 544 FunFam serine/threonine-protein kinase PBS1-like 207 312 - -
Spst4g02765 544 ProSiteProfiles Protein kinase domain profile. 238 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02765 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02765 Spst-Chr4 67455975 67459795 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02765 9 540 Receptor kinase-like Gene Family AT1G66910 39.318 4.93e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02765 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02765 - - vum:124821711 717.998