Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02763 ATGCACCCAACATTTATATTCCTCATTTTTGTGTTGTTGTTAACCACTTTGCCTCAATCCCGCTGTCAACCCAATGATCCAGTTTGTGGGCAACAGCCTTACAACTGTGGATCACTGTCCAACATCTCATACCCTTTCTGGGGTCTCAACAGACCCAGTTTTTGTGGCGGGGGTGACTCATTCAACCTCAAATGTCACGCCAACGATGCTACTACTTCAATTCAAATTGGTTCACAAAATTTCACAGTGAAGGAGATCAACATCACCTTTCAAACCATGAGAGTGGTGCGACCAGACCTTGTCCTAAATGTTTGTTCTCCGCATGTTAACAACACTGGTCTGGGTTCTAGTTTGTTCAAGTACGGTTCTTCAGTGTACAACATCACCATCTTTTACAACTGTTCCTTATCTCTAGACGCCTCTTTTGGACACTTCTCGTGTGGAAATGAGATTACTATCTTTCGTGACGGTCCGCAAGATGAGCTGCTGAGAAAATTTCCATGGATTGCGAGATGCAGGCGATACGTGGAAGTTCCGGTGGATGTTCCTTATGATAACAGTGGTGGACTTGATTTTCTGCAACAAGCTTTCGACAGCGGGTTTCCAATAAACTATACTGTTCTCAACAATCCGAAAAGTGTTACAGGTGCAACAGTTGCAGGATTGTTGATATGTATTGCAATTTTCTATATAAGATATAGGTCATCAAACTGTAAAGGAGATTTTGGGTTGGCTACAAAGAGTAACAAAAATATTGAAGCGTTCCTGCAAAATCAGGGTGCTCTGACCCTAAAAAGATACAAGTTATCAGATGTGAAGAAAATGACCAACAACTTCAAAGTTAAATTGGGACAAGGTGGTTTTGGTATCGTGTACCAAGGAAAGCTATCTAATGGTAGTCCTGTAGCTATAAAGATGTTGAATGAAGCAAAAAATAATGGTGAAGATTTTATCAATGAGGTTGCTAGCATCAGCAGAACTTCTCATATTAATGTTGTCACTCTTCTTGGATTCTGTTTGGAAGGCCGCAAGAGGGCTCTCATATATGAATTTATGTCCAATGGTTCCCTTGACAAGTTCATTTATAGAAAAGGACCAGAAGCGATTGCACCCTTGAGTTGGGACAATATATATCAAATTGCAATGGGTATAGCTAGAGGATTAGAATATTTGCATATAGGATGTAACACTCGAATTTTGCATTTTGATATAAAACCACATAACATTCTTTTGGATGACAATCTTTGTCCCAAGATATCAGATTTCGGACTAGCAAAACTCTGTCCAAGAAATGAAAGCATTATATCTATGTCAGATGCTAGAGGAACAATGGGGTATGTAGCACCAGAAGTGTTGAATAGACATTTTGCAGGAGTTTCACACAAGTCCGACGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAGGGAGGAAGAACATTAATGCTGACGCCAGTCACACAAGTGAAATATACTTCCCTCATTGGATATACAAGAGGCTCGAATTGGATACTGATTTGAGACTAGAAGAGGAGATTATGCCAGAAAAAAAGGAGATAGTAAAGAGATTGATCATAGTAGGTTTATGGTGCATTCAAACCTTTCCAAATGGTAGACCTACAATGAGTAGAGTGATAGATATGTTAGAAGCCAACATGAATTCCCTAGAAATCCCACCAAAACCTTTGCTTTCTTCTCCTACTACATCACTACCAGAATCTTCCATTTCTTGA 1737 0.3967 MHPTFIFLIFVLLLTTLPQSRCQPNDPVCGQQPYNCGSLSNISYPFWGLNRPSFCGGGDSFNLKCHANDATTSIQIGSQNFTVKEINITFQTMRVVRPDLVLNVCSPHVNNTGLGSSLFKYGSSVYNITIFYNCSLSLDASFGHFSCGNEITIFRDGPQDELLRKFPWIARCRRYVEVPVDVPYDNSGGLDFLQQAFDSGFPINYTVLNNPKSVTGATVAGLLICIAIFYIRYRSSNCKGDFGLATKSNKNIEAFLQNQGALTLKRYKLSDVKKMTNNFKVKLGQGGFGIVYQGKLSNGSPVAIKMLNEAKNNGEDFINEVASISRTSHINVVTLLGFCLEGRKRALIYEFMSNGSLDKFIYRKGPEAIAPLSWDNIYQIAMGIARGLEYLHIGCNTRILHFDIKPHNILLDDNLCPKISDFGLAKLCPRNESIISMSDARGTMGYVAPEVLNRHFAGVSHKSDVYSYGMMLLEMVGGRKNINADASHTSEIYFPHWIYKRLELDTDLRLEEEIMPEKKEIVKRLIIVGLWCIQTFPNGRPTMSRVIDMLEANMNSLEIPPKPLLSSPTTSLPESSIS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02763 578 Gene3D Transferase(Phosphotransferase) domain 1 352 563 - -
Spst4g02763 578 PANTHER RUST RESISTANCE KINASE LR10-RELATED 248 567 IPR045874 GO:0004672
Spst4g02763 578 Pfam Protein kinase domain 280 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02763 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Spst4g02763 578 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Spst4g02763 578 SMART serkin_6 277 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02763 578 FunFam PR5-like receptor kinase 352 562 - -
Spst4g02763 578 ProSiteProfiles Protein kinase domain profile. 277 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02763 578 Pfam Wall-associated receptor kinase galacturonan-binding 31 97 IPR025287 GO:0030247
Spst4g02763 578 FunFam serine/threonine-protein kinase PBS1-like 245 351 - -
Spst4g02763 578 Gene3D Phosphorylase Kinase; domain 1 250 351 - -
Spst4g02763 578 SUPERFAMILY Protein kinase-like (PK-like) 259 551 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02763 Spst-Chr4 67451600 67454267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02763 4 576 Receptor kinase-like Gene Family AT5G38260 37.697 1.41e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02763 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02763 - - gmx:100798745 733.791