Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02762 ATGTTCACTGTTTCTCCTACTATTGTATCTGCTAACAGTTTTGGTGGGGTATACAAAGGAGATATACTCAATGGTTGCTCTGTTGCTATAAAGATATTGAATGCATCCAAAGGAAATGGTGAAGACTTTATCAATGAAGTTGCTAGTATTAGTAGAACTTCTCATGTTAATGTTGTTCAACTTCTTGGATTCTGTTTGGAAGGCAGCAATAAAACTCTCATTTACGAATTCATGTCTAATGGTTCTCTTGACAAGTTTATTTACAGTAAGGGACTCAAAGCCATTCCATCGTTGAGTTGGAATAATTTGTGGCAAATTGCCAAAGGGATAGCTGAAGGACTAGAATACTTGCACAAAGGATGCAATACTCGCATTTTACATTTTGACATAAAACCGCACAACATACTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTATCAAAGCTTTGCCCCATGAAAGAGAGTACTATCTTCATGTCTGATCAAAGAGGAACAATGGGGTATAAAGCTCCAGAAGTGTGGAATATACATCTTGGTGGAGTTTCACACAAATCTGATGTTTACAGTTATGGAATGATGCTGCTAGAAATGGTGGGAGGGAGAAAAAATATTAATGCAGAAGCCAATCACACAAGTGAGATATACTTCCCACACTGGGCATACAACAGGCTAAAGCAGGGTGGAGAATTGAGACCTGAGGGGGTGGTAGCCACAGAAGAAAATGAAACAGCAAGGAGAATGACTGTAGTGGGATTATGGTGTGTTCAAACTATTCCAAAGGATAGACCTACAATGAGTAGAGTATTAGATATGCTAGAAGGCAACATGAATTCCTTGGAAATGCCTCCAAAACCTGATCTTTCTTCTCCCATTAGTTGA 891 0.3827 MFTVSPTIVSANSFGGVYKGDILNGCSVAIKILNASKGNGEDFINEVASISRTSHVNVVQLLGFCLEGSNKTLIYEFMSNGSLDKFIYSKGLKAIPSLSWNNLWQIAKGIAEGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLSKLCPMKESTIFMSDQRGTMGYKAPEVWNIHLGGVSHKSDVYSYGMMLLEMVGGRKNINAEANHTSEIYFPHWAYNRLKQGGELRPEGVVATEENETARRMTVVGLWCVQTIPKDRPTMSRVLDMLEGNMNSLEMPPKPDLSSPIS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02762 296 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02762 296 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Spst4g02762 296 SUPERFAMILY Protein kinase-like (PK-like) 12 277 IPR011009 -
Spst4g02762 296 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 290 IPR045874 GO:0004672
Spst4g02762 296 PIRSF ILK 6 285 - -
Spst4g02762 296 FunFam PR5-like receptor kinase 78 288 - -
Spst4g02762 296 SMART serkin_6 13 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02762 296 ProSiteProfiles Protein kinase domain profile. 3 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02762 296 Gene3D Transferase(Phosphotransferase) domain 1 79 286 - -
Spst4g02762 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02762 Spst-Chr4 67447802 67448908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02762 8 291 Receptor kinase-like Gene Family AT1G66910 55.052 1.92e-110 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02762 Pkinase 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02762 - - gmx:100792936 486.493