Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02761 ATGCGACCAGACCTAGCCCTTAACGTTTGTTCTCCGCAATTTGAGGACACCTATTTGAGCCATAACTTGTTCCAGTATGGTCCATCCGTGTTCAACATCACCATCTTCTACAACTGTTCCTCCTCCTCATATATAGACACCACTGTTGTGCCGATCAAGTGCGGACACGAGAATACTCTTTTTTCTGATGGTGCAGAAGACGAGCTGCTGAGAAGTTTTCCATGGCTTGAGATGTGCGAGAAGCATGTCCAAGTTCCGTTGGACGTTGTATATTATGGCGAAGGTGGAGATGATTTTCTGAACCAAGCTTTCGCTAGTGGCTTTCTGGTCAACTATACTGTTCTGCACACTGTTCCCGATGACGAGACACAAAAGAGATATAAATTTTCAGAAGTCAAGAAAATGACAGACTCCTTTAAAGTTAAACTGGGAGAAGGTGGTTTTGGTGTAGTATACAAAGGAGAGCTACCCAGTGGTTATCCTGTGGCAGTAAAGATGTTGAATTCATCCAAAGGAAATGGGCAAGACTTCATCAACGAGGTTTCTAGTATTAGTAGGACTTCTCATGTTAATGTTGTCACATTTTTTGGATTTTGTTTGGAAGGCACTAAGAAAGCTCTCATTTATGAATTCATGCATAATGGTTCCCTTGACAAGTTTATTCACAAGAAGGGACTTGAAGCCACTCCATTGTTGAGCTGGGACAATTTGTGGAAAATTGGCCTAGGAATAGCTCGAGGACTTGAGTACTTACACAGGGGATGCAATACTCGAATTTTACATTTTGACATAAAACCGCATAACATTCTTCTGGATGAGAACTTTTGTCCTAAGATATCAGATTTTGGACTTGCAAAGCTTTGTCCCAGGAGAGAGAGCATTATTTCAATGTCAGATGCTAGAGGAACAATAGGATATGTAGCTCCAGAAGTATGCAACAGACATTTTGGTGGAATTTCACACAAATCAGATGTTTACAGCTATGGAATGCTCTTGTTAGAAATGGTGGGAGTGAGGAAAAATATTGATGGGGAAGCTGGTGACACAAGTGAGGTATACTTTCCAGATTGGATATACAAAAGGTTAGAGCAGGGTGGAGATTTGAGAACTGATGGTGGGGAGATGGTCACAGAAGAAAAAGAGATAGCAAGGACAATGACTGTAGTGGGTTTATGGTGTGTTCAAACGATTCCACAAGATAGACCTACCATAAGTAGAGTAATAGATATGCTAGAAGGCAACATTAATTTCTTAGAAATACCCCCAAAACCTGCTCTTCATTCTCCCACTGGATCTGTGCCAGAATTTAGCACTAGTTCTTTTCAATCTGTGTAG 1335 0.4112 MRPDLALNVCSPQFEDTYLSHNLFQYGPSVFNITIFYNCSSSSYIDTTVVPIKCGHENTLFSDGAEDELLRSFPWLEMCEKHVQVPLDVVYYGEGGDDFLNQAFASGFLVNYTVLHTVPDDETQKRYKFSEVKKMTDSFKVKLGEGGFGVVYKGELPSGYPVAVKMLNSSKGNGQDFINEVSSISRTSHVNVVTFFGFCLEGTKKALIYEFMHNGSLDKFIHKKGLEATPLLSWDNLWKIGLGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRRESIISMSDARGTIGYVAPEVCNRHFGGISHKSDVYSYGMLLLEMVGVRKNIDGEAGDTSEVYFPDWIYKRLEQGGDLRTDGGEMVTEEKEIARTMTVVGLWCVQTIPQDRPTISRVIDMLEGNINFLEIPPKPALHSPTGSVPEFSTSSFQSV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02761 444 SUPERFAMILY Protein kinase-like (PK-like) 124 412 IPR011009 -
Spst4g02761 444 ProSiteProfiles Protein kinase domain profile. 137 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02761 444 FunFam PR5-like receptor kinase 212 423 - -
Spst4g02761 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Spst4g02761 444 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Spst4g02761 444 PANTHER RUST RESISTANCE KINASE LR10-RELATED 123 428 IPR045874 GO:0004672
Spst4g02761 444 Gene3D Transferase(Phosphotransferase) domain 1 212 425 - -
Spst4g02761 444 Gene3D Phosphorylase Kinase; domain 1 115 211 - -
Spst4g02761 444 Pfam Protein tyrosine and serine/threonine kinase 139 410 IPR001245 GO:0004672|GO:0006468
Spst4g02761 444 SMART serkin_6 137 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02761 Spst-Chr4 67434830 67437865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02761 125 440 Receptor kinase-like Gene Family AT5G38260 56.740 5.42e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02761 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02761 - - gmx:100793451 557.755