Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02760 ATGACGAAAAGATTGTTCAATGATTCTGAGCGAGAACCTGATAAGTCAGACGACAAACGGATGAGAAATAATGCTACTAGACCTTCTTTTGCTTCAGTAATTGGAGAAGTGGTCATGAGCAAAAACATTGAGAATCTTTTCACTGCCATGGAACCTTTGCTTAAAAGAGTGGTGGGTGAGGAAGTTGAGCGAGTATTGAGACAGTGGTCATGCTCCTTTACTAGGTCTCCTTCGTTGAGGCTCCAAGCAATGGAGCAACCATCAAGCTTGCAACTATGGTTCAGCAAGAGACTTTCCCTTCCAATTTTCACAAGTAGCAGGATTATTGACATTGATGAGAACCCCATCAACATAGTTCTGATGGACAAAAGCAACAATAACCAAATGGTCCCAACAACTCTACCACATGCCATCAAACTAGAACTGGTGGTTCTTGATGGAGATTTTTCTCCTTCTGGAAACGAGGATTGGACGAGTGATGAATTTAACAGACATATAGTGAAGGAGAGAAAAGGGAAGAGACCTTTAATTTCAGGAGAATTGAACCTGATCATGCGAGATGGAGTTGCATCAACTGGGGACATTGAGTTCACTGATAACTCTAGCTGGATCCGTTGCAGAAAGTTCAGAGTTGCAGTGAGGGTAGCACCAGGGAGTGTTCAAGGAGTTCGGATTCGTGAAGGAATGACTGAAGCATTTGTTGTCAAGGATCACCGTGGAGAATTGTACAAAAAACACCACCCTCCAATGCTTCATGACGAATTGTGGCGTCTGGAAAAGATTGGTAAAGATGGATCTTTCCACAGAAAATTGTCATTCCACGGCATAAAAACAGTTCAAGAATTTCTTAAACTAGCAGTTGTTGATACTCCGAAGCTAAGACATATTTTGGGCATGGGGATGTCAGACAAAATGTGGGAAGTCACAATCAAGCATGCAATGACTTGTGACTTGGGAAGCAAGTTGTACATTTATAGAGGACCACAGTTTACTGTTTTTCTGGATCCAATATGCAAATTAATTAGAGCAGAAGTTAATGGACAGACATTTTTCAACAGAGATCCAATGAGTCATTTGAATAAGTCCTATATAGACAAATTGGTGAAAGAAGCATACGTGAGATGGCATAGTTTGGAGGAGATAGATGGGGTTCTGAACGATAACATTGCTGTGTTAACCCAAGGTGATCAAACTGCTGCATCTGCAGTCACATATCAGCAGAATCAGTATTACAGTGACAAATCTGCTAGCTTTGTTGCAAACAACAACACACAAATGGGATGCTGCGACTGGTCACTTAATCAAGCTTATAGCCCAGCACCGTTTGCTAATGCCTTTCCTTTTAGTTTCTCAGGATCACAAACAGATGGAACCGCTTCAGGTTCTAGCTCTGTTGATGTTGATGGGGCCAGAAGGCAGAATTAG 1425 0.4175 MTKRLFNDSEREPDKSDDKRMRNNATRPSFASVIGEVVMSKNIENLFTAMEPLLKRVVGEEVERVLRQWSCSFTRSPSLRLQAMEQPSSLQLWFSKRLSLPIFTSSRIIDIDENPINIVLMDKSNNNQMVPTTLPHAIKLELVVLDGDFSPSGNEDWTSDEFNRHIVKERKGKRPLISGELNLIMRDGVASTGDIEFTDNSSWIRCRKFRVAVRVAPGSVQGVRIREGMTEAFVVKDHRGELYKKHHPPMLHDELWRLEKIGKDGSFHRKLSFHGIKTVQEFLKLAVVDTPKLRHILGMGMSDKMWEVTIKHAMTCDLGSKLYIYRGPQFTVFLDPICKLIRAEVNGQTFFNRDPMSHLNKSYIDKLVKEAYVRWHSLEEIDGVLNDNIAVLTQGDQTAASAVTYQQNQYYSDKSASFVANNNTQMGCCDWSLNQAYSPAPFANAFPFSFSGSQTDGTASGSSSVDVDGARRQN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02760 474 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Spst4g02760 474 Pfam Calmodulin binding protein-like N-terminal domain 90 238 IPR046831 -
Spst4g02760 474 PANTHER OS02G0177800 PROTEIN 3 432 IPR012416 GO:0005516
Spst4g02760 474 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Spst4g02760 474 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02760 Spst-Chr4 67413693 67418117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02760 6 383 Calmodulin-binding Proteins AT5G57580 46.354 7.11e-113 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02760 - - gmx:100803213 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02760 4 67413693 67418117 Spst4g02760 4 67413693 67418117 ECH
Spst3g00784 3 11384447 11387904 Spst4g02760 4 67413693 67418117 PCT