Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02753 ATGACCTTTCTCTTCAGGTTGTGTCCATGTCTGCGCAAGGGCGGCGCAACCTCCGGCGACGACGGTGGCGACCACCACGACGATCCCAACGGGCCCGGGGACTCCATGGACCTGATCTTCCCCCTCCACACTCTTCAACTCGCCACTAACTTCTTCTCCAACCTCAACCAGCTAGGTCATGGAGGCTTTGGTCCCGTCTTCAAGGGAATGATGCCAAATGGTCAAGAAGTAGCTGTTAAGAAGCTGTCATTGGAATCTAGACAAGGTGTTAAAGAATTCACCAATGAAGTCATGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTTGGTTGCTGTGCAGAAGGGCCTGAAAAGATGCTTGTCTATGAGTATCTACCTAACAAAAGTCTTGATCACTTTCTATTTGATAAGAGAAAGTCTTCATCCTTGGATTGGGCAACACGATTCAGAATAGTTACTGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAAGCCCCAGAAAGAATTATTCATAGGGACATTAAAGCTAGTAACATATTGTTGGATGAGAAGTTAAATCCAAAAATTTCAGACTTTGGTTTGGCAAAGCTATTTCCTGGGGAGGACACTCATCTGCTGACATTTAGGATTTCTGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGGGGATATCTGTCTGTGAAGACGGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCAAGATTTGCGACTGGGTTCAGAAAAAGCAGATCTCTTGAGCTATGCATGGTCGCTCTATCAAGGACGGAGGATAATGGACTTAATTGATCCATCCCTCGGTAAATACAATGGTGATGAGGCAGCCATGTGCATTCAACTAGGTTTATTGTGCTGCCAAGCAAGCATAATTGAAAGACCTGACATGAATGCTGTTCATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGTAAACCAGGAATTCAAGGTCGTACAGGACGTTGGACTACAACTACATCATCTGCTTTGACCAATACCAATACCAATGCTAGTAGTGGTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTGTAGATGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGATGAAGGCAGATGA 1173 0.4425 MTFLFRLCPCLRKGGATSGDDGGDHHDDPNGPGDSMDLIFPLHTLQLATNFFSNLNQLGHGGFGPVFKGMMPNGQEVAVKKLSLESRQGVKEFTNEVMLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSSSLDWATRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLAKLFPGEDTHLLTFRISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNQDLRLGSEKADLLSYAWSLYQGRRIMDLIDPSLGKYNGDEAAMCIQLGLLCCQASIIERPDMNAVHLMLSSDSFTLPRPGKPGIQGRTGRWTTTTSSALTNTNTNASSGTRVSGGSGSFVDDYSRNSISTSSFDEGR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02753 390 SUPERFAMILY Protein kinase-like (PK-like) 36 322 IPR011009 -
Spst4g02753 390 FunFam Cysteine-rich receptor-like protein kinase 41 128 328 - -
Spst4g02753 390 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 36 357 - -
Spst4g02753 390 MobiDBLite consensus disorder prediction 331 370 - -
Spst4g02753 390 SMART serkin_6 52 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02753 390 CDD STKc_IRAK 58 322 - -
Spst4g02753 390 ProSiteProfiles Protein kinase domain profile. 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02753 390 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 33 127 - -
Spst4g02753 390 MobiDBLite consensus disorder prediction 340 370 - -
Spst4g02753 390 Pfam Protein kinase domain 53 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02753 390 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Spst4g02753 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Spst4g02753 390 Gene3D Phosphorylase Kinase; domain 1 32 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02753 Spst-Chr4 67340494 67343616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02753 34 337 Receptor kinase-like Gene Family AT4G21410 54.221 4.35e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst4g02753 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02753 - - gmx:100790304 654.44