Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02752 ATGAAAGGTTTCACTGCGAGGAAACAGAGCAGAGACTCACTCTTTGCAGCGGCACTTGGTGGCTTTCATCTTCTTAGGGTGAGTGTCAAGATGTATACATCACGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAGTCAGTTGGACAGGCATTGTTTGATCTTGAAAATACCAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCTGTTCAAATTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGATTCAGGAAGATCCATGTCAGGCTTGTGAGAGAACTTGAGAAAAAATTTAGCGGGAAGGATGTAGTCCTGATTGCCACCAGGAGGATATTGAGGCCACCAAAGAAAGGTTCAGCCGTTCAGCGTCCTCGCAGCCGGACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTACCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAGAATTGATGGTTCTAAGATCATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAGTTTTCTGGCAAAGATGTTGTGTTTGACTATCCTACAACCGAGGCTTAG 666 0.4384 MKGFTARKQSRDSLFAAALGGFHLLRVSVKMYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFDYPTTEA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02752 221 Pfam Ribosomal protein S7e 37 216 IPR000554 GO:0003735|GO:0005840|GO:0006412
Spst4g02752 221 ProSitePatterns Ribosomal protein S7e signature. 109 122 IPR000554 GO:0003735|GO:0005840|GO:0006412
Spst4g02752 221 PANTHER 40S RIBOSOMAL PROTEIN S7 31 220 IPR000554 GO:0003735|GO:0005840|GO:0006412
Spst4g02752 221 Coils Coil 57 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02752 Spst-Chr4 67337158 67339572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02752 31 221 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.010 2.95e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02752 K02993 - gmx:100499757 369.392