Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02740 ATGGAGGGTCCCAAGTTGCCTCAACAAACAAGGAATTCATCAATCAATCAATCAATACTGACCAAATTTCCACAACTTAGTTTCCTGGTTTTGTGGGAGAATCCTTACACTGCTTTTGGAAATTTGGATAATACTATACTACTACTGGTAAATACCAAGGCCAGGTTGGGAATTTTGGAATTTGGAAAGCTGAAGGTATTGTCAGAAGCAAAGATTCAACGTGTTTTACACAGTCCACTTATGACAGGTCATAAGTTTCCTGAGGTTTTTGGACTAAAACAAGGAAGCTATGCAGATCTTCCTTCAACAAAAATTTCAGAATTGATGAAATCAACTAGTTTGGATAATGCTCCTACTCAGTCCCTTTTGAGTGTAGTCAATGGTATTTTAGAAGAAAGTGTTGAAAGAAGAAATGGTGAAATACCCCATCGTGTGGCTTGCCTATTGAGAAAGGTTGTCCAAGAGATTGAAAGACGCATATCAACTCAAGCAGATCATTTAAAAACTCAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATATCACTCAAGAATCAGAGTCCTTGAGGCTCTAGCATCTGGAACTGAGGATGAAAATAAGACTGGGAGGATTGGAAAAGAAGAAAAGAAGGTAGATGAATTAAAACAAACTCGGATGACTAAAATGGAAGAAGAAAAGGAAAATGGCATGACGCTAATTGAGAACACTAAAAGGGCAGAAAAGAGGGATTGTGACAAAGAGGTTATTAGATATATTAAAGAGTTGAAAGATAAAACTATGGAAATTTCAATATTGAAGCAAAAGCTAGAAACAATGAAGAAATCATATGAAGTACAATGTTCAGAGTTTGATTTAAAAGCTAAGGAGGAAAATGCAGCAAATGACAAAGAGGTTATTAAATGTATTAACGAGTTAGACGACAAAACTATGGAAATTTCAACATTAAAGAAGAAATTAGAAACAATGGAAAAAAAGTGTGAAGTACAATGCATACAATTGGAAGCAAAGGCTAAAGAGGAAAAGAGGACAAATGAAAAAGATGTAATTAAAGAGCTGGAAGACAAAAATTTGGAAATTTCAACATTGAAGCAAAAACTAGAAATGGTGACAAAAATGTATGAAGCACAATGTTCAGAACTGAAAGCAAAAGTTGAAGAGGAAAAGATGATTGATGGAAAAAAGGCTAATGGAAATATTAAAGAATTGGAGGACAAAAATATGGAAATTTCAACATTGAAACAGAACCTAGAGACGATGGAAAAAACATATGAAATACAATTTTCACAGTTGAAGGCAAGAGTTGAGGAGGAAAAGAGCACAGATAATAAAGAGGTTAGTAAATATGTTAAAGAGTTAGAGGAGAAAAATCTGGAAATTTCAACATTAAAGCAAAATCTAGAGACAATGAAGAAAACATATGAAGTACAATGCTCGTTGTTGAAAGCAAAAGCTGAAGAGGAAAATATGGCAAATGGAAAAGAGACTACTAGGTATATTAAAGAGTTAGAGGAAAAAAATATGGAAATTTCAGCTTTTAAGCAAGAAGTTGAAACAATGAAAAAAACGTATGAAATTCAATGTTCAAAGTTGAAAGCAAAAGCTGAAGAGGAAAAGATGGCAGGTGGGAAAGAGACTTTTAGATATATTCAAGAGTTGGAGGACAAGAATATGGAAATTTCAGCAATTAAGCAAGAACTAGAAACTATGAAAAAAACATATGAAGCACAATGTTCACAATTGAAAGCTAAATCTGAAGAACAAAAAATGGCTGATGAGAAAGAAATTATAAAATATACTAAAGCGTTAGATGAGAAAAATATGGAAATTTCAGCAATCAAGCAAGAACTGGAAACAATGAAAAAGACATATGAAGTACAGTATTCACAATTGAAAACAAAAGCTGCAGAAGAAAAAATGGCGGATGAGAAAGAAATTACTAAATGTATTAAAGAGCTAGAGCAAAAAAATATGGAAATTTCATCATTTAAGCAAAAATTGGAAGCAATGAAAAAAACAAACGAAGAACAATGCTCACAGTTGGAAGCAAAAATTGAGGATGCTAAAGGAGAACTAAAACAAAAATCACAAGAATATGAAAGTTTGTTGGAAAAACTAAGAAATAAGGTTAAAGAAAATGAAACTCTTTACGAGTCAAAATATCAGAAGTGGATCACGAAAGAGAACCAAATACGAACAGATGTGAATTTTCAGTTCAGTTCCATACAGAAACTGAAATTGTCATGGGAATCCATTAAGCAAGATGCTTTGAAAGAGCAGATGATTTTTTCTGAGGAATGTAACCGATTAGGTGTAAATCTTAAACCACTAGTAGATGCAGCTGAGAACTATCAAATAGTTCTTGCAGAAAATCGAAAACTATTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTATATTGTCGAATTAGACCATTTCTTCCTGGTCAAAAGGAAAAACAATCTATTGTGGAACACATTGGTGAAACTGACTTGGTTGTGGCAAATCCTTCCAAACAAGGAAAGGAAGGTCTTAGAACATTTAAGTTCAACAAGGTCTTTGGTCCAACCTCAACTCAAGCTGGGGTGTATGCTGATATACAAGCTTTTATACGATCAGTATTGGATGGGTATAATGTATGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATAATGCAACACCTGAGAGTGTTGGTGTTAACTATCGAGCTCTTAATGATCTCTTCAGCATATCTACGATACCTGATGCCACCATGCAACCTGTGAAGTCAACTTCAGATGTCATAAAGTTAATGGATATTGGTCTGAAAAATAGAGCTAAGGGTTCAACTTCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGAATGGATCAAAAGTCTGGTTCCACTCTTCAAGGAAATCTTCATCTGGTAGATTTAGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAGTTGGGGATAGACTCAAGGAAGCACAACATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAATGCTCATGTGCCATATAGAAATAGCAAGCTTACTCAACTTCTTCAATCATCTCTTGGTGGTCAAGCAAAAACACTCATGTTAGTCCAAATTAATTCTGACCACAAGTCTTATTCTGAATCTTTGAGTACTTTGAAGTTTGCTGAAAGGGTTTCTGGAGTTGAGTTGGGAGCTGCTAAAAGTTCTAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCCTCTCTCAAGGACACCATCTTGATTAAAGATGAAGAGATTGAAAAGTTACAATTACTTAAAGATCTAAAAAATGTATATCCTGGTGCTAATTCTGAAAATGTTGGAACTAGCTCAGAATAA 3435 0.3432 MEGPKLPQQTRNSSINQSILTKFPQLSFLVLWENPYTAFGNLDNTILLLVNTKARLGILEFGKLKVLSEAKIQRVLHSPLMTGHKFPEVFGLKQGSYADLPSTKISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQADHLKTQNNLFKAREEKYHSRIRVLEALASGTEDENKTGRIGKEEKKVDELKQTRMTKMEEEKENGMTLIENTKRAEKRDCDKEVIRYIKELKDKTMEISILKQKLETMKKSYEVQCSEFDLKAKEENAANDKEVIKCINELDDKTMEISTLKKKLETMEKKCEVQCIQLEAKAKEEKRTNEKDVIKELEDKNLEISTLKQKLEMVTKMYEAQCSELKAKVEEEKMIDGKKANGNIKELEDKNMEISTLKQNLETMEKTYEIQFSQLKARVEEEKSTDNKEVSKYVKELEEKNLEISTLKQNLETMKKTYEVQCSLLKAKAEEENMANGKETTRYIKELEEKNMEISAFKQEVETMKKTYEIQCSKLKAKAEEEKMAGGKETFRYIQELEDKNMEISAIKQELETMKKTYEAQCSQLKAKSEEQKMADEKEIIKYTKALDEKNMEISAIKQELETMKKTYEVQYSQLKTKAAEEKMADEKEITKCIKELEQKNMEISSFKQKLEAMKKTNEEQCSQLEAKIEDAKGELKQKSQEYESLLEKLRNKVKENETLYESKYQKWITKENQIRTDVNFQFSSIQKLKLSWESIKQDALKEQMIFSEECNRLGVNLKPLVDAAENYQIVLAENRKLFNEVQELKGNIRVYCRIRPFLPGQKEKQSIVEHIGETDLVVANPSKQGKEGLRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATPESVGVNYRALNDLFSISTIPDATMQPVKSTSDVIKLMDIGLKNRAKGSTSMNERSSRSHSVVSIHVRGMDQKSGSTLQGNLHLVDLAGSERVDRSEVVGDRLKEAQHINKSLSALGDVIFSLSQKNAHVPYRNSKLTQLLQSSLGGQAKTLMLVQINSDHKSYSESLSTLKFAERVSGVELGAAKSSKDGRDVRELMEQVASLKDTILIKDEEIEKLQLLKDLKNVYPGANSENVGTSSE 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02740 1144 Gene3D Kinesin motor domain 744 922 IPR036961 -
Spst4g02740 1144 Pfam Kinesin motor domain 922 1081 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 Coils Coil 602 633 - -
Spst4g02740 1144 Coils Coil 335 383 - -
Spst4g02740 1144 Coils Coil 255 275 - -
Spst4g02740 1144 SMART kinesin_4 801 1091 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 803 1121 IPR027417 -
Spst4g02740 1144 PANTHER KINESIN-LIKE PROTEIN KLP-3 82 289 IPR027640 GO:0003777|GO:0007018
Spst4g02740 1144 Coils Coil 445 472 - -
Spst4g02740 1144 ProSiteProfiles Kinesin motor domain profile. 803 1083 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 Pfam Microtubule binding 789 921 IPR031852 GO:0008017
Spst4g02740 1144 Coils Coil 399 422 - -
Spst4g02740 1144 FunFam Kinesin-related protein3 921 1125 - -
Spst4g02740 1144 Coils Coil 502 540 - -
Spst4g02740 1144 Gene3D Kinesin motor domain 923 1124 IPR036961 -
Spst4g02740 1144 Coils Coil 549 590 - -
Spst4g02740 1144 Coils Coil 305 325 - -
Spst4g02740 1144 PRINTS Kinesin heavy chain signature 984 1002 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 PRINTS Kinesin heavy chain signature 1033 1054 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 PRINTS Kinesin heavy chain signature 953 970 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 PRINTS Kinesin heavy chain signature 877 898 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02740 1144 Gene3D - 591 631 - -
Spst4g02740 1144 Gene3D - 292 334 - -
Spst4g02740 1144 Gene3D - 393 431 - -
Spst4g02740 1144 Gene3D - 641 681 - -
Spst4g02740 1144 Gene3D - 541 582 - -
Spst4g02740 1144 Gene3D - 490 531 - -
Spst4g02740 1144 Gene3D - 345 381 - -
Spst4g02740 1144 Gene3D - 439 482 - -
Spst4g02740 1144 Gene3D - 243 284 - -
Spst4g02740 1144 Coils Coil 649 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02740 Spst-Chr4 67240025 67249489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02740 791 1083 Calmodulin-binding Proteins AT5G65930 36.735 7.78e-58 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02740 K10406 - gmx:100779403 1009.98