Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02723 ATGTTACTAGCTATTCCTACAATACTCCTTGTGGTATTCATATTTATTGCATCAGCTGCTGTGTTAAAAGCAAAACAAGGCCAAGATAATGGAAAACATCCACCTGGTCCCAAGAGCCTGCCAATTATTGGTCATCTCCACATGCTAGGGAAACTACCACACCGCACCCTTCAATCCCTTGCAACAACATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTCCAACCATTGTGATATCCTCTCCTGAAGCAGCTGAACTATTCCTCAAGAACCATGACCTTAGTTTTGCTAGCAGGCCTAAAAGCATCTCATCCATATATATTTCCTATGGTGGCAAGGGCTTAGTTTTTTCTGAGTATGGTCCCTACTGGCGCAGTATGAGGAAACTGTGCACAGTACAACTTCTGATTGCATCAAAAGTTGAGATGTTTTCTCCTTTGAGAAGGGTGCAGTTGGGAGAGTTTGTCAAGTTTCTCCAGAAAACAGCATCATCGCGTGAGGTTGTCGATCTCAGTGATACTGTAGGGGATCTCATTGAGAATTTCACCTTTAAAATGATATTTGGTAGAAGCAAGGACGATGGATTCGATTTAAAGAACCTTGTTCGTGAAGTATTGAACTTGGCAGGAACTTTCAATGTTGCAGATTACTTGCCTTGGCTACGCATGTTTGATCTTCAGGGACTAGTAAAACGATTAAAGAAAGTGTGCAAATCATTTGACATAGTCTTGGAGCAGATTATCAAAGACCATGAACAATATACTGATAAAGAACAAAAAGGCCAAAAGGACTTTGTGGACATATTCCTTGCACTCATGCATCAACCCCTGGATCCTCAGGATGAACATAGTCCTCCCATTGAAATAACACATATCAAGGCTATTTTGATGACTATGATTGTGGCAGGAGTTGACACATCTGCTACAACGGTTGAGTGGGCTATGTCAGAACTCTTAAAGCATCCAAGGGTGATGAAGAAACTTCAAGATGAGTTGGAAAGTTTAGTGGGGATGAATAGAAAGGTGGAGGAGGCTGATATGGAAAAATTACCGTATTTGGACTTTGTGGTGAAGGAGACACTAAGATTGTACCCTGTTGCACCTTTGTTAGTACCTCGGGAGTGTAGAGAAGATGTTACAGTAGATGGTTATTGGATAAAGAAAAAGTCAAGGGTCATAGTGAATGCATGGGCTATAGGGAGAGATCCTAAAGTTTGGTCAGATAATGCTGAGGTGTTTTATCCTGAAAGATTTGCCAATAGCAATGTGGACATAAGAGGATTTGACTTTAGGCTCATACCATTTGGTTCAGGCCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTAACCACTGCCAAGATTGTCCTAGCTCAACTGGTTCATTGTTTCAATTGGGAGCTTCCATTGGGAATGTCCCCTGATGAGCTGGACATGACTGAGAAATTTGGCCTCGCAATGCCAAGAAGTAAGCACTTGCTAGCTGTGCCAACTTATCGCCTTGCAGGTGAAGTTGGGAAGGAAAAAATTTGA 1533 0.422 MLLAIPTILLVVFIFIASAAVLKAKQGQDNGKHPPGPKSLPIIGHLHMLGKLPHRTLQSLATTYGPIMSLKLGQVPTIVISSPEAAELFLKNHDLSFASRPKSISSIYISYGGKGLVFSEYGPYWRSMRKLCTVQLLIASKVEMFSPLRRVQLGEFVKFLQKTASSREVVDLSDTVGDLIENFTFKMIFGRSKDDGFDLKNLVREVLNLAGTFNVADYLPWLRMFDLQGLVKRLKKVCKSFDIVLEQIIKDHEQYTDKEQKGQKDFVDIFLALMHQPLDPQDEHSPPIEITHIKAILMTMIVAGVDTSATTVEWAMSELLKHPRVMKKLQDELESLVGMNRKVEEADMEKLPYLDFVVKETLRLYPVAPLLVPRECREDVTVDGYWIKKKSRVIVNAWAIGRDPKVWSDNAEVFYPERFANSNVDIRGFDFRLIPFGSGRRGCPGIHLGLTTAKIVLAQLVHCFNWELPLGMSPDELDMTEKFGLAMPRSKHLLAVPTYRLAGEVGKEKI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02723 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 Coils Coil 326 346 - -
Spst4g02723 510 PANTHER CYTOCHROME P450 93A3-LIKE 9 501 - -
Spst4g02723 510 CDD CYP71-like 63 493 - -
Spst4g02723 510 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 FunFam Cytochrome P450 83B1 20 496 - -
Spst4g02723 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Spst4g02723 510 Gene3D Cytochrome P450 20 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02723 510 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02723 Spst-Chr4 67108432 67110322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02723 7 505 Cytochrome P450 AT5G07990 40.354 7.60e-127 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02723 - - gmx:100798918 832.017