Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02703 ATGCAGAAAGCAGCAGCGTCAAAATCTGATCCAAAACCTTCTCAAATTTGGCATCCTCCAAATAATACGGAAGTTCATAATCACCACCGTGATGATGATAACGATCGTTTTTATCATGGAGTGAATTTCACGACCCAGAGAGGGTTCGGGACGAAACTCAAGTCGGGGTTGAAGGAAACGTTGTTTCCTGATGACCCCTTCAGGCAGTTCAAGAACGAGGAGAAGCCAATGAGGAGGGTGATGAAAGGGCTGCAATACTTCATCCCTATCTTTGAGTGGCTACCAACATACAGTTGGCGTCTCTTTTGCTCTGACTTGATTGCTGGCCTCACCATCTCAAGCCTTGCCATCCCTCAAGGCATTAGCTATGCCAAACTTGCTGATCTTCCTCCCCTCATTGGCCTTTATTCAAGCTTTGTCCCACCGTTAGTGTATGCTATTTTTGGGAGTTCAAGGCACATGGCAGTGGGGACGATAGCAGCAGCATCATTGCTGATTGGTCAAACCATACAAACCGTGGCAGACCCAGATGAAGACCCAACCTTGTATCTTCATTTGATTTTCACAACCACCTTTATCACCGGAGTTTTCCAGGCTTGTTTGGGAATTTTCAGGCTGGGGATATTGGTGGACTTCTTCTCTCATTCTACCATCAATGGCTTCATGGGAGGGACAGCAGTAATTCTGATCCTCCAACAACTTAAGGGGGTGTTTGGCATGGTACATTTTTCACATAAAACCAACTTGGTGGCAGTGGTGAAGAGCATCATCGACAATAGACACGAGATTAGGTGGGAACCTACAGTTCTTGGTGTGGTCTTCCTAGCTTTCTTGCAATTTACCAGATACTTGAGGAACAAGAACCCAAAACTCTTTTGGGTACAGGCTATAGGTCCAATGGTGACTGTGGTAGTTGCTGGCGTTTTCACCTACCTAGTCAAGGGCCAAAATCATGGAATTCAAATTGTGGGGCATCTAGATAAAGGATTAAATCCATTGTCCATTCACTATTTGAACTTCAATGGTAAATATTTACCAGCAGTTTTGCAAGCTGGTCTTATCACAGGGGTGTTATCATTAGCAGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTGGCTGATAATTCACCTCATGATGGGAACAAAGAAATGATAGCTTTTGGTCTTATGAACTTATTCGGATCTTTTACTTCCTGCTACTTGACTAGTGGACCATTTTCGAAGACAGCAGTGAATTACAATGCAGGGTGTAAGACTGCGATGGCGAATGTGATACAGGCAGTAATAATGGCAATGACGTTACAATTTTTGGCACCATTATTTGGCTACACCCCTCTTGTTGCTCTCTCAGTCATTATCATATCTGCCATGCTCGGTCTCATTCATTATGAAGAAGTCATGCATCTCTTCAAAGTTGACAAGTTTGATTTTGTCATTTGCATGGCTGCATTCCTTGGAGTTATCTTCATAAGCATGGATGTTGGCCTCATGATTTCTGTTGGACTTGGGCTTCTTAGAGCACTTTTGTACGTGGCTAGACCATTGCCATGCAAGCTTGGAAAGTTGCCTGAAATAGGCTTATACAGAGACACTGAGCAATATAATGTTTCAACATTCCGAGGGGTTATTATTATTCAACTTGGTTCTCCCGTTTACTTTGCGAATTCTATTTATGTCAAAGAAAGGATTATGAGGTATATTCGAAGTGAGCAAACCGCCACTGGAGATAATGTTGAGCACATCATAATTGATTTATCAGGAGTGACATCGATTGACACAACTGCAATTAAAGGATTGGATGAGATGATTAAAGTGTTGACAAAGAATGGAACTAAGACATTGTTAGTAAACCCAAGAGTGGAGGTGATGGAGAAGCTTCTGGCATCAAAATTTGTTGACAAAATTGGGAAGGAGACATTCTATCTAACATTGGATGATGCAGTGATGGCAAGCCAATATTCTCTTCGTTCATCAAAGGAAAATAATAATGGTGAAGATGGCCTCGTTTAA 2010 0.4229 MQKAAASKSDPKPSQIWHPPNNTEVHNHHRDDDNDRFYHGVNFTTQRGFGTKLKSGLKETLFPDDPFRQFKNEEKPMRRVMKGLQYFIPIFEWLPTYSWRLFCSDLIAGLTISSLAIPQGISYAKLADLPPLIGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIGQTIQTVADPDEDPTLYLHLIFTTTFITGVFQACLGIFRLGILVDFFSHSTINGFMGGTAVILILQQLKGVFGMVHFSHKTNLVAVVKSIIDNRHEIRWEPTVLGVVFLAFLQFTRYLRNKNPKLFWVQAIGPMVTVVVAGVFTYLVKGQNHGIQIVGHLDKGLNPLSIHYLNFNGKYLPAVLQAGLITGVLSLAEGIAIGRSFAVADNSPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVIQAVIMAMTLQFLAPLFGYTPLVALSVIIISAMLGLIHYEEVMHLFKVDKFDFVICMAAFLGVIFISMDVGLMISVGLGLLRALLYVARPLPCKLGKLPEIGLYRDTEQYNVSTFRGVIIIQLGSPVYFANSIYVKERIMRYIRSEQTATGDNVEHIIIDLSGVTSIDTTAIKGLDEMIKVLTKNGTKTLLVNPRVEVMEKLLASKFVDKIGKETFYLTLDDAVMASQYSLRSSKENNNGEDGLV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02703 669 ProSitePatterns SLC26A transporters signature. 131 152 IPR018045 GO:0008271|GO:0008272
Spst4g02703 669 MobiDBLite consensus disorder prediction 1 31 - -
Spst4g02703 669 CDD STAS_SulP_like_sulfate_transporter 541 644 - -
Spst4g02703 669 NCBIfam sulfate permease 89 647 IPR001902 GO:0016020|GO:0055085
Spst4g02703 669 SUPERFAMILY SpoIIaa-like 533 648 IPR036513 -
Spst4g02703 669 PANTHER SULFATE TRANSPORTER 51 654 IPR001902 GO:0016020|GO:0055085
Spst4g02703 669 Gene3D STAS domain 514 654 IPR036513 -
Spst4g02703 669 Pfam Sulfate permease family 102 483 IPR011547 GO:0016020
Spst4g02703 669 ProSiteProfiles STAS domain profile. 532 651 IPR002645 -
Spst4g02703 669 Pfam STAS domain 534 647 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02703 Spst-Chr4 66905959 66910587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02703 39 659 Inorganic Solute Cotransporters AT5G19600 61.897 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02703 K17471 - gmx:100789107 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02703 4 66905959 66910587 Spst4g02703 4 66905959 66910587 ECH