Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02701 ATGGATGACATGGAAGACGACGCAAGGTACCCTCCCAAGTCGTTCTCCCTCAATCGTCAGAACCCCTCTCACCGCCACAAACACCCCGTACGCGCCGCCCCTTACCATCGTCCAATGCCCCCGCGCTACGACCAGCCCATCGTGGATGACGGCGATGACGACGAAGAAAACGAACCTGAAGATTTCGACGAAGACAACGACGAAGGCGAAAACGGCTACGACGAAAACGACGTCGTCGGGTATCCCCGGATCCCGAAGAAGCGCAAGGTGGTAGTTGCGCCAGGGTCCTACGAGTTCGCGCCACGTGTCAAGTTCTCGTACGGTTCGCGCGGTTCGGGTTCCTCCGTTGAAGAGTGGAGCGAGCACGAGACTTTCGTGCTGCTGGAGGCGTGGGGGGACAAGTTCCTCCAGCTCGGTAGGAACAGTTTGAGGTCCGAGGAATGGCACGAGGTTGCCGAAAAGGTTTCGGAGGAATTGAAGACAGAGAGAAGCGTAACGCAGTGTAGGAGCGTGTTGGACAAGCTGAAGAGAAGGTACAAGAAGGAGAAAACCAGAATGGATGAAATGGGGTTGGGCTCTTGCAAATGGGCCTACTTCAAGAAGATGGACATGTTGATGGCTTCCTCTGCAAGGCAAGAGTATGGTCTTGCATGTGGGGTAGATTCTGGGGAGTATGTGTTTATGAACACAAGGGTTTACTTGAACAGGTCCAATGGGTTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGATGATGAGGAAGAGGAGTGTGGTGGTGGGGCTGGGGCTGCTGCGGAGGATGAGGAGGATGAGACATCGTTCCGCGTGTTGGCAGATTCTATTCAGAAGTTTGGGAAGATTTATGAGAAGATTGAGAACAGCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTTAACAGGGAGTTGGAGCTGCAGAAGAAGCAGATTCTCGAGAGGGCGCAGGCGGAGATTGCCAAAATTCAGGAAGGGGATGAGGAGGATACTGACACTTCGACGGAGAATCTCAGTGAATGA 1059 0.5335 MDDMEDDARYPPKSFSLNRQNPSHRHKHPVRAAPYHRPMPPRYDQPIVDDGDDDEENEPEDFDEDNDEGENGYDENDVVGYPRIPKKRKVVVAPGSYEFAPRVKFSYGSRGSGSSVEEWSEHETFVLLEAWGDKFLQLGRNSLRSEEWHEVAEKVSEELKTERSVTQCRSVLDKLKRRYKKEKTRMDEMGLGSCKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESESDDDDEEEECGGGAGAAAEDEEDETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEGDEEDTDTSTENLSE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02701 352 MobiDBLite consensus disorder prediction 333 352 - -
Spst4g02701 352 MobiDBLite consensus disorder prediction 247 271 - -
Spst4g02701 352 Coils Coil 292 334 - -
Spst4g02701 352 Gene3D - 119 181 - -
Spst4g02701 352 Pfam Myb/SANT-like DNA-binding domain 118 204 IPR044822 -
Spst4g02701 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 70 339 IPR044823 -
Spst4g02701 352 MobiDBLite consensus disorder prediction 1 80 - -
Spst4g02701 352 MobiDBLite consensus disorder prediction 48 74 - -
Spst4g02701 352 MobiDBLite consensus disorder prediction 238 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02701 Spst-Chr4 66888617 66889675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02701 119 341 Trihelix Transcription Factor Family AT1G54060 30.292 7.00e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst4g02701 Myb_DNA-bind_4 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02701 - - gmx:100790166 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02701 4 66888617 66889675 Spst4g02701 4 66888617 66889675 ECH