Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02697 ATGGCTGGTCTGAACTCAAATAGCCATTCTCCGTCCTCCTTCAAGATGCCCACAATCAAGTTCTCCAAGCTCTTCATCAATGGAAATTTTGTTGATTCTGTTTCAGGACGAGAATTTGAGACAATAGATCCAAGAAATGAACAGGTAATCGCAAGAATTGCGGAAGGAACGAAAGAAGACATCGACAACGCCGTAAAAGCGTCGCGTGTGGCTTTCGACGACGGTCCATGGCCACGCATGCCCGGCGTGGAAAGAGCAAGAATTATGATGAAATGGGCAGACCTAATTGATGAAAACAGAGAAGAACTAGCAGCATTGGATGCCATTGATGCTGGAAAATTATATCATATGCTTAAAGCTTTTGAGATTCCTGCAGCAGCAAATACTCTACGTTATTATGCAGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAACCAGCACGGGAGTTACATGCATATACTTTACTGGAACCAATTGGTGTTGTGGGACACATCATTCCCTGGAATTTCCCCAGCCCCATTTTTTTCACAAAGGTTAGCCCTGCCTTGGCTGCTGGTTGCACTATGGTCCTTAAGCCTGCTGAACAAACCCCTCTCTCAGCATTGTTTTATGCTCATCTGGCTAAACTGGCTGGAATTCCAGATGGGGTGCTCAACGTAGTTCCTGGATTAGGCCCAATTGCAGGTGCTGCCATATGTTCACACATGGACATTGATAAGGTCAGTTTTACAGGTTCAACAGAAGTGGGACGTGAAATAATGCATGCTGCAGCCAATAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCTCTCATAATTTTTGATGATGCAGATCTAGATAAAGCTGTCGAGCTTGCTTTCCTGGGTGTAATGCACAATAAGGGAGAAATTTGTGTTGCAGGTTCTCGTGTATTTGTTCAGGAAGGAATTTATGATGAGTTTGAGAAGAGGTTAGTGGAGAAGGCAAACACTTGGGTTGTTGGAGATCCTTTTGATTCCAAAGTTCAACAAGGGCCTCAGGCATGTAGTAATGTTGTAGCACAAACTCATTATGTTGATAAAAAGCAATTTGAAAAAATTATGTCCTACATAGAGCATGGAAAAAGAGAGGGGGCCACTCTCATCACCGGGGGCAAAAGAGTGGGTAACCAGGGCTACTACATTGAGCCAACAATTTTTACTAACGTTAAGGAGAACATGGCTATAGAGCAAGATGAAATATTTGGCCCCGTGATGGCATTAATGAAGTTTAAAACCATTGAGGATGCGATTAAAAGTGCTAACAATACAAGATATGGCTTAGCAGCAGGCATTATAACCAAGAGTTTAGATACAGCAAACACAGTGTCAAGGTCAATTCGTGCAGGCATTGTTTGGATAAACTGTTACTTTGCCTTCGGGGGTGACATTCCCTATGGTGGATACAAGATGAGTGGATTCGGAAGAGATTGTGGATTAGAAGCACTTCACAAATATCTACAAGTTAAATCTATTGTAACACCCATTTATAATTCTCCTTGGCTTTGA 1542 0.4228 MAGLNSNSHSPSSFKMPTIKFSKLFINGNFVDSVSGREFETIDPRNEQVIARIAEGTKEDIDNAVKASRVAFDDGPWPRMPGVERARIMMKWADLIDENREELAALDAIDAGKLYHMLKAFEIPAAANTLRYYAGAADKIHGEVLKPARELHAYTLLEPIGVVGHIIPWNFPSPIFFTKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGLGPIAGAAICSHMDIDKVSFTGSTEVGREIMHAAANSNLKPVSLELGGKSPLIIFDDADLDKAVELAFLGVMHNKGEICVAGSRVFVQEGIYDEFEKRLVEKANTWVVGDPFDSKVQQGPQACSNVVAQTHYVDKKQFEKIMSYIEHGKREGATLITGGKRVGNQGYYIEPTIFTNVKENMAIEQDEIFGPVMALMKFKTIEDAIKSANNTRYGLAAGIITKSLDTANTVSRSIRAGIVWINCYFAFGGDIPYGGYKMSGFGRDCGLEALHKYLQVKSIVTPIYNSPWL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02697 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 472 IPR016163 GO:0016620
Spst4g02697 513 FunFam Aldehyde dehydrogenase3 272 472 - -
Spst4g02697 513 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 288 - -
Spst4g02697 513 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Spst4g02697 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 501 IPR016162 GO:0016491
Spst4g02697 513 Pfam Aldehyde dehydrogenase family 30 503 IPR015590 GO:0016491
Spst4g02697 513 FunFam Aldehyde dehydrogenase, putative 475 501 - -
Spst4g02697 513 SUPERFAMILY ALDH-like 14 509 IPR016161 GO:0016491
Spst4g02697 513 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02697 Spst-Chr4 66863661 66868148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02697 5 513 Aldehyde Dehydrogenase Gene Family AT3G24503 67.843 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02697 K12355 - gmx:100791918 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00830 3 11798013 11802648 Spst4g02697 4 66863661 66868148 PCT