Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02696 ATGGCTGCGATCTCCAATGGCCACGAAGCTTCTTCCTTCAACATTCCTCCCATCAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTTCATTCCATTTCAGGAAAAGAGTTTGAGACAGTAGATCCGAGGACAGAGGAAGTGATGACGAAGATTGCAGAAGGAGGAAAGGAAGACATTGATGTCGCTGTAAAAGCAGCACGTGTTGCTTTCGATGATGGTCCATGGCCTCGTATGCCCGGCGCTGAAAGAGCAAGAATTATGATGAAATGGGCAGACTTAATTGATCAAAACGTGGAGGAAATAGCAGCATTGGAGACCATCGATGGTGGGAAGTTGTACCATTATTGTAAGGCTTTTGAGATTCCTGCAGCAGCAAGTACTCTACGTTACTATGCTGGTGCTGCAGATAAAATTCACGGGGAGGTATTAAAGGCTTCCAGGGAGTTACATGCATATACTTTACTAGAACCAATTGGTGTTGTGGGACACATTATTCCCTGGAACTTCCCTACCACCATGTTTTTGGCCAAGGTTAGCCCTGCCTTGGCTGCAGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCAGCCTTGTTTTATGCTCATCTATCTAAACTGGCTGGAATCCCTGATGGAGTCCTTAATGTAGTACCTGGATTTGGTCCAACTGCAGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTAAGTTTTACGGGATCAACAGAAGTGGGGCGTGAAATAATGCGTGCTGCAGCTAATAGTAATTTGAAACCAGTCTCACTTGAATTAGGAGGCAAGTCACCCCTCATAGTTTTTGATGATGCTGATGTAGATAAAGCTGCTGAGCTTGCTCTCTTGGGCATCTTATTCAATAAGGGAGAAATTTGTGTTGCAGGTTCCCGTGTGCTTGTTCAAGAAGGAATTTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGACCTCAGGTTGACAAGAAGCAATTTGAAAAGATCCTTTCTTATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGTGGAAAAAGTGTGGGAAACAAGGGTTACTACATTGAACCTACAATTTTCTCTAATGTTAAGGAGGACATGATTATAGTACAGGATGAGATATTTGGTCCTGTGATGGCTTTGATGAAGTTTAAGAGTATTGAGGATGCAATCAAGAGTGCCAATAATACTAAATATGGTCTAGCATCAGGCATAGTGACCAAGAGTTTGGACACAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGAATTGTTTGGATCAATTGCTACTTTGCCTTCGGGAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGACTTTGGATTGGAAGCCCTGCACAAGTATCTGCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1506 0.4309 MAAISNGHEASSFNIPPIKFTKLFINGQFVHSISGKEFETVDPRTEEVMTKIAEGGKEDIDVAVKAARVAFDDGPWPRMPGAERARIMMKWADLIDQNVEEIAALETIDGGKLYHYCKAFEIPAAASTLRYYAGAADKIHGEVLKASRELHAYTLLEPIGVVGHIIPWNFPTTMFLAKVSPALAAGCTMVLKPAEQTPLSALFYAHLSKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMRAAANSNLKPVSLELGGKSPLIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNKGYYIEPTIFSNVKEDMIIVQDEIFGPVMALMKFKSIEDAIKSANNTKYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02696 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Spst4g02696 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 491 - -
Spst4g02696 501 Pfam Aldehyde dehydrogenase family 31 491 IPR015590 GO:0016491
Spst4g02696 501 SUPERFAMILY ALDH-like 16 497 IPR016161 GO:0016491
Spst4g02696 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Spst4g02696 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Spst4g02696 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 291 - -
Spst4g02696 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Spst4g02696 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Spst4g02696 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02696 Spst-Chr4 66856902 66861842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02696 10 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.791 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00831 3 11803745 11807503 Spst4g02696 4 66856902 66861842 PCT