Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02695 ATGACAAATCTCAGCAATGGCTCCTCCACCTACTCACAATCCTTTCTCCAGATTCCACCTGTAAAATTTACCAAGCTTTTCATCAATGGAAAATTCCTAGACTCTGTTTCAGGAAAAACGTTTGAGACTGTTGATCCAAGAACAGAGGAAGTGGTTGCTGAAATAGCAGAGGCTACCAAAGAAGATGTTGATATTGCTGTGAAGGCCGCACGTGAAGCATTTGATTCTGGTTCATGGCCACGCATGCCTGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGGCACAGCTAATTGAACAGAACGTAGAAGAAATAGCAGCATTGGACACCATTGATGGAGGGAAGCTATTCAGTTGGTGTAAGGCTGTGGATGTTCCTGAAGCCTGCAATATCCTTCGTTACTATGCTGGCGCTGCTGATAAAATTCATGGAAATGTTTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTTGGTGTTGTTGGACATATTATCCCTTGGAATTTCCCCACGGTCATGTTCTTCGCCAAGGTCGCCCCGGCCTTGGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCTCTGTCATCACTCTTCTATGCTCATCTTGCTAAGCTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGGGCTGCAATAAGCTCACATATGGACATTGATGCGGTCAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCGGCCTTGAGCAATTTGAAACCTGTTTCACTTGAATTAGGAGGAAAGTCGCCAGTTTTGATTTTTGATGACGCTGATGTAGACAAGGCTGTTGATCTTGCTCTCTTTGGAATCCTACACAACAAGGGAGAAATCTGTGTTGCATTCTCTAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAAAAGGTAGTGGAGAAGGCTAAAACTTGGGTAGTGGGAGACCCTTTTGATCCAAAAGTTCAGCAAGGACCCCAAACTAGTAAGGCACAATTTGACAAAATTCTTTCCTATATTGAGCATGGAAAGAGTGAAGGAGCCACCCTGTTGACTGGGGGTAAGCCAGTGGGCAACAGGGGATACTACATTGAGCCAACCATTTTTGCCAATGTTAAGGAGGACATGCTAATTGCACAAGAGGAAATATTTGGACCTGTGATGGCACTTTCTAAGTTCAAGACCATTGAAGATGCAATTAAGAAAGCCAACAGCTGCAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTGCCAACACTGTATCAAGGTCCATCCGCGCAGGCATTATTTGGATCAACTGCTTCTTTGCATTTGATATTGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGGGATTATGGACTTGAAGCACTTCATAAATATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1515 0.4376 MTNLSNGSSTYSQSFLQIPPVKFTKLFINGKFLDSVSGKTFETVDPRTEEVVAEIAEATKEDVDIAVKAAREAFDSGSWPRMPGAERAKIMLKWAQLIEQNVEEIAALDTIDGGKLFSWCKAVDVPEACNILRYYAGAADKIHGNVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTVMFFAKVAPALAAGCTMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGSTAGAAISSHMDIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFDKILSYIEHGKSEGATLLTGGKPVGNRGYYIEPTIFANVKEDMLIAQEEIFGPVMALSKFKTIEDAIKKANSCKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02695 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Spst4g02695 504 FunFam Aldehyde dehydrogenase3 274 463 - -
Spst4g02695 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 495 - -
Spst4g02695 504 Pfam Aldehyde dehydrogenase family 35 494 IPR015590 GO:0016491
Spst4g02695 504 FunFam Aldehyde dehydrogenase, putative 466 492 - -
Spst4g02695 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Spst4g02695 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Spst4g02695 504 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 28 292 - -
Spst4g02695 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Spst4g02695 504 SUPERFAMILY ALDH-like 15 500 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02695 Spst-Chr4 66833733 66837176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02695 6 504 Aldehyde Dehydrogenase Gene Family AT3G24503 68.600 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02695 K12355 - gmx:100784449 935.25