Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02687 ATGAGCGTAGTTGGGAGAGCGATGCCGCGATCCAATTCCGGCGTGCACCATCACCGTCAGAGCTCCGATAACTTCATCCTCGACGCTCACAGAAGCTGGTTACACTCTTCGACTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTGAGGAAAATCGACGATGATCGTGTTTTGAGCAGTGGCTTGCTTGATCTGCATTCTTTAGATACCGAGCTTTTACCTGAGATGTATGGTGCTCACAATGACTACTTTACCAATCACACTGTTCGGGGTCAGAGTTTTGATGACTACGAGTCAATCCTCTCTGGTAACAAACTTGTACAAAGGTCTCGGGGATTACCTGAGAACAGTTTCGTCAAAAGTGTTCCAGCAGATAAAGAGAGAGCAAACAATGTTGCCAAGATCAAAGTTGCGGTCCGGAAGAGACCCCTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGACATTATATCCATAGATTCAAATTTTCTCACAGTTCATGAAAGAAAACTGAAGGTTGACTTGACAGAATATGTTGAGAAACATGAATTTCTTTTTGATGCTGTCCTGAATGAAGATGTTTCAAATGATGAAGTTTATGCTGAGACTGTGGAGCCAATTGTTCCACTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGTAGTGGGAAGACATATACTATGCAACCATTGCCTCTCAAAGCTTCCCAAGATATTTTTAGACTAATGCACCATACCTACCGGAATCAAGGTTTCCAATTGTTTGTTAGTTTCTTCGAAATATATGGGGGAAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTATCTAAAGTCGAGACAATCAAGGAATTTATTGAGAAAGGAAATGCCACAAGAAGTACTGGTACAACTGGAGCAAATGAGGAATCCTCTCGATCACATGCCATACTTCAACTTTGCATTAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGACTTGTGGGCAAACTATCTTTTATAGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGACAAGCAGACTAGGATTGAAGGGGCGGAAATAAATAAAAGCTTACTTGCTCTGAAGGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACAGAAGTTCTGCGCGATTCTTTTGTTGGTAATTCGCGCACTGTAATGATATCTTGCATTTCGCCTAGCTCAGGTTCATGCGAGCATACTCTTAACACATTAAGATATGCTGACAGAGTGAAGAGTCTGTCAAAAGGGAACAACTCTAGAAGGGATCCCCTTTCTTCCTCAAACCTTAGAGAGTGCACTGTGTTGCCTGGGTCTTCAATTTTAGCTCATGATAACTTGGAGGATGAAACAACGTATGTTTCCAGTGACAGGAATCGATTTGGTTGGCCCAAACAGCAGGAAAGAGAACCCTCTCCTCCAAATAATGTGGACCATGTTCCACGTGGTAGAATGGGGGGGAATTTGGCGCCATCTGTGTATTCTGATCAACAAAATGGTCAAAGAGGTAGTCAAAATGACAAAACTGCAAATGAATATGTTGGACCAACATATGAACAAGACAGAACAAGAAAAACAAGTAAGAGGGTGGTGGATAACAACCAGTTATCTGCTGTAGAGGACAAGAAGAAGATAGAATCTCGAGTTAAGCATGTAGATGCATCACATTTTGAGACTAATCATTCTGATCTAGATGATTATTTAAATGCCCTCCTGAAGGAAGAGGAAGATCTAGTAACAGCTCACCGGAGACAGGTGGAGGAAACCATGGACATTGTTAGGGAGGAGATGGATTTACTTGTTGAAGCGGACCAACTAGGAAATCAATTGGATGATTATATTTCCAAGTTGAATACCATTTTATCACAAAAGACTGCCGGAATATTCCAATTGCAGACACGATTGGCTCAGTTTCAGAGACGTTTAAATGAGTATAATGTTCTCGTATCTTCTGATATTGCCTCTATGATTTCATTGCCGTGGATCCAGACCCGTCCTTGTTCTACGCTTAAATGCTTAGACGGAGTGTACCCTTTTCTTCCCATGCATGATGATGTGAAACCTAGGCAGGTGTTGTGA 2211 0.4188 MSVVGRAMPRSNSGVHHHRQSSDNFILDAHRSWLHSSTFAQEFGTRSSSLRKIDDDRVLSSGLLDLHSLDTELLPEMYGAHNDYFTNHTVRGQSFDDYESILSGNKLVQRSRGLPENSFVKSVPADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIISIDSNFLTVHERKLKVDLTEYVEKHEFLFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDIFRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSRRDPLSSSNLRECTVLPGSSILAHDNLEDETTYVSSDRNRFGWPKQQEREPSPPNNVDHVPRGRMGGNLAPSVYSDQQNGQRGSQNDKTANEYVGPTYEQDRTRKTSKRVVDNNQLSAVEDKKKIESRVKHVDASHFETNHSDLDDYLNALLKEEEDLVTAHRRQVEETMDIVREEMDLLVEADQLGNQLDDYISKLNTILSQKTAGIFQLQTRLAQFQRRLNEYNVLVSSDIASMISLPWIQTRPCSTLKCLDGVYPFLPMHDDVKPRQVL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02687 736 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst4g02687 736 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 ProSiteProfiles Kinesin motor domain profile. 135 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 FunFam Kinesin-like protein 117 461 - -
Spst4g02687 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 458 IPR027417 -
Spst4g02687 736 PANTHER KINESIN-RELATED PROTEIN 6 46 693 IPR027640 GO:0003777|GO:0007018
Spst4g02687 736 SMART kinesin_4 133 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 Gene3D Kinesin motor domain 116 461 IPR036961 -
Spst4g02687 736 MobiDBLite consensus disorder prediction 491 572 - -
Spst4g02687 736 MobiDBLite consensus disorder prediction 535 557 - -
Spst4g02687 736 Pfam Kinesin motor domain 141 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02687 736 Coils Coil 627 647 - -
Spst4g02687 736 CDD KISc_KIF2_like 135 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02687 Spst-Chr4 66789547 66794706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02687 134 458 Calmodulin-binding Proteins AT5G65930 34.925 3.28e-45 173