Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02667 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGGAAATATAGGACCAGTTCTCAGAAAATGAAGGACAAGACAAAAACTGGGAGGCCGGCTGAGACATCATTGGCTAACAAACAAGACAAAGAAAAGAAGGTTTCAAAAGGATCCGCAGAAAGGTCTTTTGATCCATCATCCTTGCAGCTCATGGAGGTGTCTAGAGGGGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTAGGTATGATGGAAGTTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTACTAATGCTTCGCAAGGTGCAAGAAGCTTCAAAACACATGGCTAGTTTGAAGAGAAGACAAAATGGGAAATCTGAAAGTGGCAGATTTGATGCAATGCCAATTGATGGGACTACACATTGTGATCATTTTGGTGAACAAAGTTATCCCATGGGGTTCCAAAGACGTTGGCCTTCAGCTGATGGTTCTTCAAGTAGTTGCACTGAGGAGCTTAAGAAAGTGATTAAGGAGAGCCTGGTTAGTCAAAATTTGTTCACAACCACTGAAGGGTTGGATTCAGCATCCACATTCCACTCTACAAACTCAAGTCAATCTTCTGTGGCTTGGAATGATAAGCATTCTGATTCTTCTTTCTCACCAACAACTTCAAGGAGGGAAAGCCGATCCAATCTGGTTGCCAAGCTGATGGGTTTGGAAGAAATCCCTTCAAGATCACTTCCAGCTGTTATACAGAAACAGTTGGAGAGTCCAAAGGTTCTCAATCACAAAAGACCTATATTTGACATAGATATGCCTAAGGTGAGAAAAAATGTTGAGAAGGTTAATCTAGAACGTAAGATGACCTTGAAGGAAATTCTTGAGACTACTCATTTCAATGGACTTCTGAAGAAGAGTCCTGTCAGAGAGCCTAATGTTCAGGTCAATCATTCCATTAATCCATATTACAAACATTGTGGTGATTTACCTCCTATTGTACTTATGAAACCTCGATGTACTCCATATCAGGAATGTGTGAACAGTTATGAGCATGTTGTTCCTCCAGAAAAGTTATCCCTTAGAAATCTTAAAGCAAAAGCTGTCCCTTCCAAAGTGTTCCAACACAAGGAAGGATCAACCACCAACATGGGGAAAAAAATGGAAGAACATGTATCCAAAAGGTTTGCCAAAGAGGAAAGAACTAAGCTCCTCAGGGAGTTTGAGGAGTTGAAAGAAAAAGAAATCAAGTCTACTGAAAATGAGAAGGCTCCAGGAGGTAAGGTAAAACTGCCAATTCATGTCACTCACAAATCACAAGTAAATGAAACTGTTGATAGAAAAGCTAAGGTGAAGATCATTAACACTAGTAGAAAGCTACCAGAAAAGGAGGTTTCAAAACCCAAACAACAAAATCTTATCCCAGTGGGTGATGTTTCGAAATCCAAAGTTGTGACAAAATCCCATCAAGATCAAGGAGAAATCAGCTCTACAGGTACCAAGTTGAGGAAGCCACACAGTGGGTCCATAATTGAAAAGAATGAGATTCCCAGCAGGAAGAATATTGTTTCAAATTCAAACACCGTCTCAAAACCAAAGAGTAAAAAAATTAGTAATTCCAAGGAACAGAAAAAGAAGCAGATGAAGAAGCAAAGAGCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGATGAACGGTTAGGCCAAAAAGAAGTAAAGAGTGTTGATGTTTCTCATAGAGATGATTACCCTGAGATCAGAATAATAACTACAATACCAGATGATCTTGCATTGAAGCATGAAGAAGTAGATGCATCTGCAAGTAAGATTAGAGAAATTTGTGATCAAAACCAGAGTTCTTCTAGTGATGATTATTTTATGCTCAAGTCTGCACGTGAAAATGATGCCATTCCTGCTGAGAAAGCTCATGACAGCATCAATATCAGTGAAACCGATTGCAAGTCTGAGAAAGAGAGTTCCGAGCTTAAAAATTTGCTTCTGTCAAGTCAATCGTTTATTGAACATGCAGAGGAGCTCCTCAATCTTGATGATGACTGTCCCAAGATCCTACAGAAAAGTGAAACTAAGGAAATAGCCAATCTCAGACTCCACTTGGACTGTGCAAATGAACTCACTGAGCGCAAAAGCCTTCAGGGGTCACAAGCAGTTCACCCTTTATTGCTAACTTGTGCGGGGAATCCAAGATTGCACATTTCTTTAGGTAGGTTGGTTGATGAAGTCTATAGTGCCATTGAGCATCTAACATCGTACACTGAAAAACTAGCTTCAGATAATATATATGCAATGATGGAGAGAGATATAAAGGGAAACAATGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAATTGTCAATGAAGTAGAGAACCTAGTTTTAGGAGGATTGATTGAGGAGGTAATTGTAAATTTATGA 2505 0.3992 MYRPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKTGRPAETSLANKQDKEKKVSKGSAERSFDPSSLQLMEVSRGAQRLNNMIDSWSRGLRYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASKHMASLKRRQNGKSESGRFDAMPIDGTTHCDHFGEQSYPMGFQRRWPSADGSSSSCTEELKKVIKESLVSQNLFTTTEGLDSASTFHSTNSSQSSVAWNDKHSDSSFSPTTSRRESRSNLVAKLMGLEEIPSRSLPAVIQKQLESPKVLNHKRPIFDIDMPKVRKNVEKVNLERKMTLKEILETTHFNGLLKKSPVREPNVQVNHSINPYYKHCGDLPPIVLMKPRCTPYQECVNSYEHVVPPEKLSLRNLKAKAVPSKVFQHKEGSTTNMGKKMEEHVSKRFAKEERTKLLREFEELKEKEIKSTENEKAPGGKVKLPIHVTHKSQVNETVDRKAKVKIINTSRKLPEKEVSKPKQQNLIPVGDVSKSKVVTKSHQDQGEISSTGTKLRKPHSGSIIEKNEIPSRKNIVSNSNTVSKPKSKKISNSKEQKKKQMKKQRAAVAEPEAAKPVDERLGQKEVKSVDVSHRDDYPEIRIITTIPDDLALKHEEVDASASKIREICDQNQSSSSDDYFMLKSARENDAIPAEKAHDSINISETDCKSEKESSELKNLLLSSQSFIEHAEELLNLDDDCPKILQKSETKEIANLRLHLDCANELTERKSLQGSQAVHPLLLTCAGNPRLHISLGRLVDEVYSAIEHLTSYTEKLASDNIYAMMERDIKGNNGLINGIWNWGWRHGFSADEAEQIVNEVENLVLGGLIEEVIVNL 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02667 834 PANTHER OS01G0228800 PROTEIN-RELATED 1 833 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 561 578 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 530 546 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 207 240 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 25 59 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 472 578 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 25 68 - -
Spst4g02667 834 MobiDBLite consensus disorder prediction 501 516 - -
Spst4g02667 834 Coils Coil 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02667 Spst-Chr4 66602514 66605493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02667 669 831 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.386 5.72e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02667 - - gmx:100797863 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02667 4 66602514 66605493 Spst4g02667 4 66602514 66605493 ECH
Spst3g00849 3 11966946 11969993 Spst4g02667 4 66602514 66605493 PCT