Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02641 ATGGCTTCTTCAATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCCTCTCTTCTTGCAACCCTTCTCAAAAGCTCAGTCTTTTTCATCTGGGTAACCGTATTAGACTGTTACATAATTTTGGCCTGAAAGCTTCTAAGTTTTCGAGGCATGATGATGATAGCTGCATGAGAGTGATGGCATCTGGGGATATGTCCTCAGCTGCTACACAGGAAAATGCACTAGATTGGGTCAAACATGACAAGAGGAGAATGCTTCATGTTGTGTATCGAGTTGGGGACTTGGAAAAGACCATAAAATTTTATAAAGAGTGTCTCGGAATGAAGTTGCTCAGAAAGCGAGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTGACATACAATTATGGGATTGACAAGTATGACATTGGAGATGGATTTGGCCATTTTGGTCTTGCAGTGGATGATATTTCAAGAATAGTGGATCTTGTGAGAGCTAAGGGTGGCAAAATTACTAGGGAGCCTACGCTTGCCAAGGGAAGCAACAAAGTAGTTGCATGCATTGAGGATCCTGATGGTTATCAATTTGAACTTTTGGAAAGGGCTGCCTCTCCGGATCCTTTGTGCAAAGTAATGCTTCGAGTGGGTGATCTTGACCGTTCCATTAAATTTTACGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAATCCAAGAACACAATAGCAATACTGGGTTATGGCCCAGAGGAAAAAAATGCTGTCCTGGAGTTGACTTACAATTATGGAGTCACAGAATATGATAAAGGAGACGCTTATGCTCAGATTGCAATTGCTACAGAGGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTATTCGTGAACCTGGACCAATACCTGATATAAAGACAAAGATCACATCATGTGTGGACCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGTTGACTTTAGTAGGGAGTTGGAGTAG 1041 0.4207 MASSIRPSLSSFMLPSLSSCNPSQKLSLFHLGNRIRLLHNFGLKASKFSRHDDDSCMRVMASGDMSSAATQENALDWVKHDKRRMLHVVYRVGDLEKTIKFYKECLGMKLLRKRDMQEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAVDDISRIVDLVRAKGGKITREPTLAKGSNKVVACIEDPDGYQFELLERAASPDPLCKVMLRVGDLDRSIKFYEKAFGMELLRTQDDPESKNTIAILGYGPEEKNAVLELTYNYGVTEYDKGDAYAQIAIATEDVYKTAEAIKLAGGKIIREPGPIPDIKTKITSCVDPDGWKTVFVDNVDFSRELE 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02641 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Spst4g02641 346 PANTHER LACTOYLGLUTATHIONE LYASE 61 346 - -
Spst4g02641 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 332 IPR004360 -
Spst4g02641 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Spst4g02641 346 FunFam Lactoylglutathione lyase 211 346 - -
Spst4g02641 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 209 IPR029068 -
Spst4g02641 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Spst4g02641 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 338 IPR029068 -
Spst4g02641 346 Gene3D - 211 346 IPR029068 -
Spst4g02641 346 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Spst4g02641 346 NCBIfam lactoylglutathione lyase 84 209 IPR004361 GO:0004462|GO:0046872
Spst4g02641 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Spst4g02641 346 Gene3D - 55 210 IPR029068 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst4g02641 Spst-Chr4 66351444 66354869 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02641 217 335 Calmodulin-binding Proteins AT1G08110 28.082 7.55e-08 50.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02641 4 66351444 66354869 Spst4g02641 4 66351444 66354869 ECH
Spst3g00869 3 12155814 12160875 Spst4g02641 4 66351444 66354869 PCT