Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02638 ATGGGCTGCATTTACTCGCGAGTCTGCATAGGCGACAACTGCAGAGGCTCCAGCATCAATGGAGACCCCATCGCCAGAACCACCGACGTTGCCGAAGTCGCCAATTTCTCCCCCTCCTCTTCCGACGTCGAAGATGGCGAAATCAGAGACCAACTCAACCAATTGAGCATCACGCGAGACTCTGAAGCCGGAATCCGAAGACTTGCTAGGGTTTCCGCGCAGTTCCTTCCGCCAGATGGTTCACGAATCGTCAAAGTCCCTTCTGGGAACTTCGAATTGAGATACTCCTTCTTGTCTCAGCGAGGTTACTACCCCGATGCACTCGATAAAGCTAACCAGGACAGTTTCTGCATCCACACTCCTTTCGGTACTGTTCTTGTTGAATTTTTGTTTTCAGCTGTTTCTGTTTGTGGCTTGGCTGCTTCTGTTTGTACGAACCCTAACGACCACTTTTTTGGCGTCTTTGACGGCCATGGTGAGTTTGGAGCTCAGTGCTCGCAGTTCGTGAAGCGGAAATTGTGTGAGAATTTGCTCAGGAACTCCAAGTTCCGTGGTGATCCTGTTGAGGCTTGTCATGCAGCGTTTTTGGCGACGAATTCGCAGCTTCATGCTGATATTTTGGATGACAGCATGAGCGGGACGACGGCTATCACGGTGCTGGTGAGGGGCAGGACGATATACGTGGCGAATTCCGGCGATTCGAGGGCGGTGATGGCTGAGAGGAGAGGGAAGGAAATTGTGGCCGTTGATTTGTCGATTGATCAGACGCCGTTTAGGAGTGATGAGCTCGAGAGGGTGAAGCTCTGTGGGGCGAGGGTTCTTACTCTGGATCAGATTGAGGGGTTGAAGAACCCTGATGTGCAGTGTTGGGGCACTGAGGAGAGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCCAATGGGATGTACCCGGGGACGGCTTTCACCAGGAGCATTGGTGACTCTATTGCGGAGACTATTGGGGTTGTGGCGAATCCTGAGATTGTTGTGTTTAAGCTCACGCAGGATCACCCTTTCTTTGTGCTTGCTAGTGATGGGGTGTTTGAATTTCTCTCTAGCCAGACTGTGGTTGACATGGTTGTAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCCATTGTGGCAGAATCTTATCGACGCTGGCTGCAGTATGAAACTCGTACAGATGACATTACAGTCATCATTGTACATGTAAATGGGCTAACTGAATCAACTGTTGGTCAGTCAGCTAGTTATGGTGATGTTTTGAGAAACCCTGTTCCTCAAGTTGTAGAGGTGACAGGTTCAGAATCCCCTTCCACCTTCGGCTGGAGTGCTAGAAACCATCGTGTAAGACATGACTTATCAAGGGCACGCCTCCGAGCTCTTGAAAATTCTCTAGAAAATGGGCAAGCTTGGGTCCCTCCATCTTCAGCCCATAGAAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCATTGCACGATCATTTTCTCTTCCGGAAGCTCACGGATTCTCAGTGTCATGTGTTATTGGATTGCATGCAACGAGTGGAGGTCGAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTCGAGGTTTTGGCGACTCAGCGAGAGGCAAAGGCAAGGGTTGTGGCACCTGCAGGCTTTGAAATCTTCTTTAAATGTCTTAGTCATGAAGAAAAAGAAGGGGACGTACCTAGGGTTTTGCAGCAGTACACTGCTGAAAAACTCTCTTGTTTTGGAGAACTTGCTCTAATGTACAATAAACCACTCCAGGCTTCCGTACGTGCCGTAACAGAAGGAACTCTTTGGGCTTTAAAGCGAGAAGATTTCCGTGGGATTTTAACGTCAGAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCTGTAGATCTCCTCTCAAGGTTATCAATTTTACAACTCAGTCAGATTTCTGATTCCCTTTCTGAAGTTTCCTTCTCAGATGGGCAGACAATAATAGACAAAAATGAAATCCTTGCATTGTACATTATACAAAAGGGACGAGTAAAAATCACTTTTGATTCTGATTTATTGATGAGTCCAAATGCCTACAGCCTCAAGCCTGACACTCAAAACGAGGATGATGTACAGAACAGAAGAGAAATATCAATAGAGAAGCCCGAGGGAAGCTATTTTGGTGAATGGGCTCTTTATGGTGAACATATTGGTTCCATAAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTCAAGGGATAATTCCAAGGAGTTGACTAGAAATTATGATTTTTCATCCCTTGATAAAGTCCAACTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGTTCCGAAATAGGGCTTGCAAATTTAAGAGAATCAGAAAATTTGCTTACACTGAAGAGATTTTCTAAGCCAAAGGTGAGAAGGTTTGGAAAGGAATCACAAGTCATGAAAGAGAAAGATTTGATTAAGGGTATGGGCTCTTCAGCTTGTATACCACAGGTTTTATGCACTTGTGCTGATCGCATGTATGCTGGAATCCTGCTAAATACTCGCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCAGCGCAATTTTGTGCTGCATCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTATCACCTGATGTTTTGATGTTGGAGCAAACAGGACAGATACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCTGGTGAGAGAACATTCACAATTTGTGGGATGGCAGATTCTCTTGCTCCAGAGATTGTTTTGGGAAAAGGCCACGGTTTCCCTGCGGACTGGTGGGCATTGGGAGTTTTAATATATTTTATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAAAGGAAGCTACATCTTCCCGAAACTTTTAGCCCTGAGACGGCTGATCTCATCTCCAAGCTACTTGAAGTGGAAGAAAACTCTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAGTCACCCATGGTTTAATGGTATTCAATGGGAAGGGATTAGAAACCACACTGTTCCTGTTCCTAAGGAAATTATTTCTCGGATAACACAGTACTTGGAAGTTCATTCTGAGGATTGTAGTAGTCTCTATCTGGGCTCCCCTGTACAGGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG 3357 0.4549 MGCIYSRVCIGDNCRGSSINGDPIARTTDVAEVANFSPSSSDVEDGEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTVLVEFLFSAVSVCGLAASVCTNPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRGDPVEACHAAFLATNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVMAERRGKEIVAVDLSIDQTPFRSDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEESDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFKLTQDHPFFVLASDGVFEFLSSQTVVDMVVKFKDPRDACAAIVAESYRRWLQYETRTDDITVIIVHVNGLTESTVGQSASYGDVLRNPVPQVVEVTGSESPSTFGWSARNHRVRHDLSRARLRALENSLENGQAWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVEPGDIIVKQGGEGDCFYVVGSGEFEVLATQREAKARVVAPAGFEIFFKCLSHEEKEGDVPRVLQQYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWALKREDFRGILTSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSDGQTIIDKNEILALYIIQKGRVKITFDSDLLMSPNAYSLKPDTQNEDDVQNRREISIEKPEGSYFGEWALYGEHIGSISAVAVGDVVCALLTKDKFESVIGSLQKISQEDHKSRDNSKELTRNYDFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRESENLLTLKRFSKPKVRRFGKESQVMKEKDLIKGMGSSACIPQVLCTCADRMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGQIQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPETFSPETADLISKLLEVEENSRLGSQGPDSVKSHPWFNGIQWEGIRNHTVPVPKEIISRITQYLEVHSEDCSSLYLGSPVQEVEELNVPEWLEDW 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02638 1118 ProSiteProfiles cAMP/cGMP binding motif profile. 499 629 IPR000595 -
Spst4g02638 1118 ProSiteProfiles PPM-type phosphatase domain profile. 94 405 IPR001932 -
Spst4g02638 1118 Gene3D Phosphorylase Kinase; domain 1 804 890 - -
Spst4g02638 1118 SMART serkin_6 814 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02638 1118 Pfam Protein kinase domain 824 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02638 1118 SUPERFAMILY cAMP-binding domain-like 639 773 IPR018490 -
Spst4g02638 1118 CDD CAP_ED 647 770 IPR000595 -
Spst4g02638 1118 SUPERFAMILY PP2C-like 82 407 IPR036457 -
Spst4g02638 1118 Gene3D Jelly Rolls 466 632 IPR014710 -
Spst4g02638 1118 CDD CAP_ED 499 629 IPR000595 -
Spst4g02638 1118 SUPERFAMILY Protein kinase-like (PK-like) 794 1093 IPR011009 -
Spst4g02638 1118 Gene3D Jelly Rolls 637 788 IPR014710 -
Spst4g02638 1118 ProSiteProfiles cAMP/cGMP binding motif profile. 647 786 IPR000595 -
Spst4g02638 1118 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 637 785 - -
Spst4g02638 1118 SUPERFAMILY cAMP-binding domain-like 480 630 IPR018490 -
Spst4g02638 1118 PRINTS cAMP-dependent protein kinase signature 592 601 - -
Spst4g02638 1118 PRINTS cAMP-dependent protein kinase signature 520 534 - -
Spst4g02638 1118 PRINTS cAMP-dependent protein kinase signature 535 549 - -
Spst4g02638 1118 PRINTS cAMP-dependent protein kinase signature 765 777 - -
Spst4g02638 1118 ProSiteProfiles Protein kinase domain profile. 806 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02638 1118 Pfam Cyclic nucleotide-binding domain 666 769 IPR000595 -
Spst4g02638 1118 Pfam Cyclic nucleotide-binding domain 518 630 IPR000595 -
Spst4g02638 1118 Gene3D Transferase(Phosphotransferase) domain 1 891 1076 - -
Spst4g02638 1118 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 482 1076 - -
Spst4g02638 1118 Pfam Protein phosphatase 2C 146 386 IPR001932 -
Spst4g02638 1118 SMART PP2C_4 90 403 IPR001932 -
Spst4g02638 1118 ProSitePatterns PPM-type phosphatase domain signature. 151 159 IPR000222 GO:0043169
Spst4g02638 1118 SMART cnmp_10 499 644 IPR000595 -
Spst4g02638 1118 SMART cnmp_10 647 784 IPR000595 -
Spst4g02638 1118 CDD PP2Cc 110 405 IPR001932 -
Spst4g02638 1118 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 134 407 - -
Spst4g02638 1118 Gene3D - 89 406 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02638 Spst-Chr4 66332383 66339783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02638 1 1118 PP2C-type Phosphatase Gene Family AT2G20050 65.502 0.0 1488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Spst4g02638 Pkinase 2.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02638 - - gmx:100799821 1981.84