Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02604 ATGATGCCGAGGAAGCTAACAAACTATTATTGGCGCCTGGTTTCTCTCTCCTTGTGTTTGTCCATCTTTGATTTGAATGTCATCGAAAGTTGTGCATCCTCCACCTCCAACTCTGGTCTTCCTCAACAATTTGAACAATTTGAAACAAGAGATAGGCCTTTCTGGAGGGCGTGCACGCCACACCCTTCCTTGTGCGTGTGCCAACCCTGTCCCTTCACTATGGCACTCCCCACTTCTCTGACTCCATTTTCATTTCTCCTATCATCATCATTATTAGCACACCTTCTCCTCCGCATCGTCACTGCTTCAGAAACAGAATTGCTCCTTCAATTCAAGGACTCCATCGAAAACAACCATGCATTGTCTTCGTGGAATCAATCCATCCCTTCATGTTCAGGTGAAAAATCTAATTGGCCTTACGTTCAGTGTTACAAGGGACACATTTGGGGATTGACGCTCGAAAACATGAATCTCAAAGGGGTTGTTGACGTCCAAACCCTCAAAGAGTTACCATATCTCCGAACCTTCAGCCTCAAGAACAATGATTTTGACACTTCCTGGCCTAATATCAATAATTTATTGGGGTTGAAGACCCTTTACCTTTCAGATAACAAGTTTAACGGAGATATTCCTGCTCAGGCTTTTCAAGATATGAAATGGTTGAAGAAAATTCATTTATCTAACAACCAATTTACAGGTTCTATTCCAACTTCCCTCACATCCACGCCTAGACTTGTGGAATTGAGGTTGGAGGGAAACAATTTCACTGGCTCCATTCCCAATTTTCAACATGCATTCAAATCATTTAGTGTAGCTAATAATCAATTAGAGGGAGAAATACCAAACAACCTCCGTAACATGCCAGCTTCAGCTTTCTCTGGTAATGAAGAATTATGTGGAGCACCGTTGGGAGCATGTTCCACCAAAAAGAAATCACCTATGAGAATTATTGTGGTTGTGGTTCTTGTTATTGTTGCTCTGGTTGTGATTGGAGCAGTAGCATTGTTCATCCTTCGCAAAAGAAGAGAACAAGAGCCAACAGAGTCTACAGAAAATCCATCATCAACGTCCCAAAAGAAAGCTAAAAGTAGGGAAGCATCAGATGAAGGAAGTCATAGGTCCCGAGCCTCGAGCCACGGCAGCAAAAGAGACATGAAATTATCATTTGTGCGGGATGACACAGAGCATTTTGATTTGCATGAACTTTTGAGAGCCTCAGCTGAGATACTGGGTAGTGGTTGTTACAGCTCTTCCTACAAGGCTGCTTTGCCAAATGGATCAGTGTTGGTGGTAAAGCGATTCAAGCAAATGAACAATGTGGGGAAGGAAGAGTTTCACGAGCATATGCGACGGATTGGAAGGCTAAATCATCCTAATTTGCTTCCTCTCATTGCCTACTACTACAGAAAGGAGGAGAAACTCTTGGTTACCAACTTTATGCACAATGGCAGCTTGGCTGTTCGCCTCCACGGAAACCAATCTTTAGAACAACCATGTCTAGACTGGGGAAGTCGGTTGAAAATAGTGAAAGGCGTTGCAAAAGGACTTGAATATCTTTACGTGGAGATGCCAAGCCTAATTGCGCCACATGGACATCTAAAGTCCGCCAACGTTCTTCTGAATGAATCTTTGGAGCCCATTCTCACGGACTATGGGTTGGTACCAGTGATAAATCAAGACCTTGCACCTGACATCATTGTGATGTACAAGTCTCCAGAGTATTTGCAGCATGGCCGCATTACGAAGAAAACCGATGTGTGGTGTCTTGGGATACTTATTTTGGAGATTCTAACAGGAAACCTCCCCACAAACTTTATACAAGGTAAAGGAAGTGAATGGAGTTTGGTAAATTGGGTTCACTCAATTGTCCCAGAAGATTGGAGTAAAGAGGTGTTCGATAAGAACATGTACGTAGCCAAAAACAGTGAAGGGGAGATGATAAAGCTTTTGAAGATTGCATTGACTTGTTGTGAAGGGGATGTGGACAAGAGATGGGACTTAAAAGAAGCTGTCAATAGAATTTATGAAGTAAAGGAAAGAGATTATGATGAGGAGGATAACTCCCGTTCTCCTTCTGATGCAAGTGAAGTTGATATCAAGAAGGCTCACTCAAGTGAGTCATACTGGAGAAGATACCCTGCACCCAACTGTATCTTCCCCAAACCAAGGGGTTTGGAACCTAACAACGAAGTGCAAACCAATCTGCAACAGCATTTTCCCACTGAGTTCATGCACCAGATCCCTTGA 2247 0.4299 MMPRKLTNYYWRLVSLSLCLSIFDLNVIESCASSTSNSGLPQQFEQFETRDRPFWRACTPHPSLCVCQPCPFTMALPTSLTPFSFLLSSSLLAHLLLRIVTASETELLLQFKDSIENNHALSSWNQSIPSCSGEKSNWPYVQCYKGHIWGLTLENMNLKGVVDVQTLKELPYLRTFSLKNNDFDTSWPNINNLLGLKTLYLSDNKFNGDIPAQAFQDMKWLKKIHLSNNQFTGSIPTSLTSTPRLVELRLEGNNFTGSIPNFQHAFKSFSVANNQLEGEIPNNLRNMPASAFSGNEELCGAPLGACSTKKKSPMRIIVVVVLVIVALVVIGAVALFILRKRREQEPTESTENPSSTSQKKAKSREASDEGSHRSRASSHGSKRDMKLSFVRDDTEHFDLHELLRASAEILGSGCYSSSYKAALPNGSVLVVKRFKQMNNVGKEEFHEHMRRIGRLNHPNLLPLIAYYYRKEEKLLVTNFMHNGSLAVRLHGNQSLEQPCLDWGSRLKIVKGVAKGLEYLYVEMPSLIAPHGHLKSANVLLNESLEPILTDYGLVPVINQDLAPDIIVMYKSPEYLQHGRITKKTDVWCLGILILEILTGNLPTNFIQGKGSEWSLVNWVHSIVPEDWSKEVFDKNMYVAKNSEGEMIKLLKIALTCCEGDVDKRWDLKEAVNRIYEVKERDYDEEDNSRSPSDASEVDIKKAHSSESYWRRYPAPNCIFPKPRGLEPNNEVQTNLQQHFPTEFMHQIP 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02604 748 MobiDBLite consensus disorder prediction 342 385 - -
Spst4g02604 748 Gene3D Phosphorylase Kinase; domain 1 368 479 - -
Spst4g02604 748 SUPERFAMILY L domain-like 102 287 - -
Spst4g02604 748 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 164 259 - -
Spst4g02604 748 Pfam Leucine rich repeat N-terminal domain 103 143 IPR013210 -
Spst4g02604 748 Gene3D Transferase(Phosphotransferase) domain 1 480 701 - -
Spst4g02604 748 Gene3D Ribonuclease Inhibitor 101 266 IPR032675 -
Spst4g02604 748 Gene3D Ribonuclease Inhibitor 267 306 IPR032675 -
Spst4g02604 748 SUPERFAMILY Protein kinase-like (PK-like) 407 679 IPR011009 -
Spst4g02604 748 FunFam pollen receptor-like kinase 1 373 479 - -
Spst4g02604 748 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 92 680 IPR046959 -
Spst4g02604 748 MobiDBLite consensus disorder prediction 361 385 - -
Spst4g02604 748 Pfam Protein kinase domain 407 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02604 748 ProSiteProfiles Protein kinase domain profile. 404 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02604 748 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Spst4g02604 748 FunFam Pollen receptor-like kinase 1 480 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02604 Spst-Chr4 65927606 65932184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02604 103 707 Receptor kinase-like Gene Family AT5G35390 48.657 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst4g02604 Pkinase 4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02604 - - gmx:100785189 838.565