Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02603 ATGTCGAGGATGAATGCAGAGAAGAAGCTTGGTGCTGGACGTGTGGTCGCTGTGGCCATTGAGAATAACAAGACAAGCCAACACGCTGCCAAGTGGGCAGTGGACAATCTTCTTCCCAAGGACCAATGTCTCTTACTAATCCATGTTAGACAAAGACCCGCTTCAGCGGATCATACGCACGAAACTGTGGGCGACAACGAATCCAAGGAACTCTTTGAATCATTTCGAGTCTTCTGCAACAGAAAAAGTATACAATGCAGAGAAGTGTTGTTGGACGACATGGACATATCAAAGGCATTAGTAGAAATCATTTCCACACATTCCATCGAGCTTCTTGTACTTGGGGCGCCATCAAGGGGTGGCATTGTTAGAAGATTTAGAACAACGGATGTTCCAAGCTCTGTGTCAAAGGGAGCACCGCCATTCTGCACAGTGTATATAATTTCTAAAGGAAAAATCTCAAGCGTGAGATCTGCTACTGCTCCATTGCCTCCTAAAGTTGCCGCAACCCCTTTGTTTGGGAATGGAACACGCCAAACGGTGTTGGATGACAATGATATCATATCGCCGTTCACAAGGGCTGGCAAATCATACGAGTCTTCAAAACTTCCTGATTCTGACATATCATTTGTGAGCAGCGGAAGGCCAAGTATTGATCGGTTGTTCCCAACAATGTACGACGATTTGGACAGTGCAAGTGGAATAAGCCCAGGTAGATTTTCGTGTGGGTCGGATTATGACGCCAGAAGCTTTGCTTCTTCCTTGTCCTCGCAAGGACACAATAGCATCGATGACTTCTCCTTCTCGTCGCAATCAAGGTTATCAGACTGCACGGATGACATGGAATTGGAGGTGAGGAGGCTGAAGCTGGAACTGAAGCAGACGATGGATATGTACAGCTCAGCCTGCAAGGAAGCTATGAGTGCAAAGCAGAAGGCAATGGAGCTTCAACGTTGGAAAGCGGAAGAACAGAAGAAGTTGGAAGAGTCGCAAACGAGTGAAGCCTCTTCCATACAACTCATGGAGATGGAGCAGGAAAAGATCAGAGCAGAAGCCCTTGAAAAAATCGCTGCATTGGAAGCACAGAAGAGAATGGGCCACATAGAGAGGAAGAAACCAACTGACACCTTTGGACACGGCCCTGCCATGTACAGAAGGTACACGATTGAGGAGATTGAAGAGGCAACAAATATGTTTTCGGACTCTCTAAAGATCGGCGAAGGAGGTTATGGTCCAGTCTACAGAAGTGAATTGGATTGCACGCAGGTTGCTATCAAGGTTTTGAAGCCAGATGCAAATCAAGGACGCGAGCAGTTTCAGCAGGAAGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTTTGTTGCTGGGGGCATGTCCAGAGTATGGTTGTCTAGTGTATGAGTACATGGCGAATGGAAGCTTGGATGATTGCTTGTTCAGGAGAGGAAATTCTCGTCCACCTCTTCCATGGCAGCTAAGATTCCAAATTGCTGCAGAGATAGCAACAGGTCTGCTTTTCCTTCACCAGACAAAACCAGAGCCACTGGTCCACCGTGACCTAAAACCGGCCAACATTCTGCTTGACCGCAACTACGTGAGCAAGATCAGTGACGTGGGGTTGGCCAGGCTGGTGCCTCCTTCAGTTGCTGACACAGTCACTCAGTATCGCATGACTTCCACTGCTGGAACCTTCTGCTACATCGACCCGGAGTACCAGCAAACGGGGATGCTGGGAATAAAATCAGACATATACTCTCTGGGGATCATGCTTCTGCAATTGGTGACGGCGAAGCCTCCGATGGGTTTGACTCATCATGTTGCGAGAGCCATCGAGAAGGGGACTTTTGCTGAGATACTTGACCCAGCTGTTGAGGATTGGCCAGTTGAACATGCCTTGCATTTCGCAAAGCTTTCCCTGGGATGTGCTGAAATGAGGAGAAAGGATAGGCCTGATCTTGGAAAAGTTGTCTTGCCTGAGCTCAATAAGCTCAGGGCATTTGCTGAACAAAACATGTCGCCGATGATGATATTTGGACTTCGAAGTGGAGCTGGTGCAGGGTATCTTCCAAGAAGCACCAACTCTTCCACACATTCTGACGTGAGTGAGACATCGTCTGGCTTCTCCGAAAATGAAAGCCGCTCAAGCTCATCATCACAGGGGAGAATAAAATCACCAAGGAATAGGAATAGGATGATTTTGGAGAGAGGGGTTGTTGGGCTTGGAATAGTAGCAGCCATGAGTATGACCAACATCAACAACTCCACTGGTGTTGTTTCCTCTGCTAAACCTGCTGCCAACTTTCGTGGAACCACAATCTATGGTATTTTCTATGCTTCCCCTCTCAACACTGGAAACCGCTTTTTGTTTCCCACCCCTCATTTTCTCAATTCCTGCAACCTTTGCCACAAACATCATCATGGAATCGACATCTTCATTTACAGACAGGAGTTGTGTTGCAGAGGGGAGAAAGCGTTTTGTAGTGAAGAATGCCGTGAGGCTCACATTACAAAGTATGATCATCAGCAAGAGAAGTACTACTCCACCTCTCCTCACATCAAACCAATTCTGCAGCACAATAATGGCCTCACGCCCACATCATCTACTATGCCTATGCCTGTGCCTATTCTTGCAGCATGA 2646 0.4728 MSRMNAEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRPASADHTHETVGDNESKELFESFRVFCNRKSIQCREVLLDDMDISKALVEIISTHSIELLVLGAPSRGGIVRRFRTTDVPSSVSKGAPPFCTVYIISKGKISSVRSATAPLPPKVAATPLFGNGTRQTVLDDNDIISPFTRAGKSYESSKLPDSDISFVSSGRPSIDRLFPTMYDDLDSASGISPGRFSCGSDYDARSFASSLSSQGHNSIDDFSFSSQSRLSDCTDDMELEVRRLKLELKQTMDMYSSACKEAMSAKQKAMELQRWKAEEQKKLEESQTSEASSIQLMEMEQEKIRAEALEKIAALEAQKRMGHIERKKPTDTFGHGPAMYRRYTIEEIEEATNMFSDSLKIGEGGYGPVYRSELDCTQVAIKVLKPDANQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGNSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVARAIEKGTFAEILDPAVEDWPVEHALHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRAFAEQNMSPMMIFGLRSGAGAGYLPRSTNSSTHSDVSETSSGFSENESRSSSSSQGRIKSPRNRNRMILERGVVGLGIVAAMSMTNINNSTGVVSSAKPAANFRGTTIYGIFYASPLNTGNRFLFPTPHFLNSCNLCHKHHHGIDIFIYRQELCCRGEKAFCSEECREAHITKYDHQQEKYYSTSPHIKPILQHNNGLTPTSSTMPMPVPILAA 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02603 881 PANTHER OS02G0152300 PROTEIN 15 698 - -
Spst4g02603 881 FunFam U-box domain-containing protein 51 472 673 - -
Spst4g02603 881 SUPERFAMILY Protein kinase-like (PK-like) 380 659 IPR011009 -
Spst4g02603 881 Gene3D Phosphorylase Kinase; domain 1 372 471 - -
Spst4g02603 881 Gene3D HUPs 14 149 IPR014729 -
Spst4g02603 881 Coils Coil 278 298 - -
Spst4g02603 881 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 471 - -
Spst4g02603 881 Coils Coil 342 362 - -
Spst4g02603 881 Gene3D Transferase(Phosphotransferase) domain 1 472 678 - -
Spst4g02603 881 ProSiteProfiles Protein kinase domain profile. 399 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02603 881 SMART serkin_6 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02603 881 MobiDBLite consensus disorder prediction 691 728 - -
Spst4g02603 881 Pfam Protein kinase domain 402 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02603 881 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 126 - -
Spst4g02603 881 Pfam zinc-finger of the FCS-type, C2-C2 792 840 IPR007650 -
Spst4g02603 881 MobiDBLite consensus disorder prediction 691 731 - -
Spst4g02603 881 Pfam Universal stress protein family 14 140 IPR006016 -
Spst4g02603 881 CDD STK_N 15 151 - -
Spst4g02603 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Spst4g02603 881 ProSiteProfiles Zinc finger FLZ-type profile. 796 845 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02603 Spst-Chr4 65921825 65927503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02603 16 683 Receptor kinase-like Gene Family AT5G35380 57.123 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst4g02603 Pkinase 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02603 - - gmx:100785729 1115.91