Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02583 ATGGTGACGTTGGCCATCACCAGGTTGAAGAGGGAACAATGCAACCGCACAAAACACGATTCAAGCTTCTCCCGTTGGAAGATTCTGATTGGCCCTTCTGATTGGGAAGACCATTCCAAAGGTAAGGAAGGGTGTGCAAGATACAGGATTCATAATCTCCCACAAGAATCAAGTCCAGGCGTGTATGAGCTTGGAATTGCTGTGTCTAGTGGTGGTTTGGGGCGTCAAATTTCCAAGCTTGGTCGTCATCCTGACCGCATAGTAGTGGTTTACCTTGGACAAGCTGACAATGTGAGAACAAGACTCCAGAGATATGGCAGAACTGGAGCTCACTTGGACAGTGGCTGTTCTGATGATTCTTCTCTCCAAAAGGGGCGCCCCTTGTTTCAAGAGGTGTTTTCACAAGGATTCTCAATCGTTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCCTGCGAACAGAATCTCAGCTGCTTAGTACATTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGAGGCCTGAAGAAATTCTTCAAAAGCTTCAAAAAATTGCTTCCGGCTCTATAACACTTTCAGATGTGACCAGAGCGCTACTACCATTCACTCAGAAGCAAGTGGGTATACGAATTAAATCAAGCAAGCTACCTCAGGCAGATCACAAGTTAGATGAAGCAGACAATGGAAACCATAATTTCCTATCTCGAGTATTCAGTTTTAACAGATCACGTCCCAGGATAGTTCAAAGTATCACTGATGTTACTCAGGAACAGGAGAATGCTAAAATTTGTGGAGTGGCATTGGGTGATGGTTTAATTTGTAGAAGGCCACCAGCTGAGAAAAGATTGAGATGTCCTGAACACAAAGGAATGAGAGCTAATGCTTCCATTGCCGAACCAATCACGGTACCCAAGTCAGAGAACAATGTGGTATTGGAACCCGATGTGTGTTGTCAAACAAAGGGAAATGAATACAGATACCAAAATGACAGCCATGAAGACCCTCCACAAACAGTGATTGGTAGTCCTGTTGATGAAAGTCTGACGAACACCAATATATGTGGAATCATCTTAAATGAAGGCTTCACCTGTAGAAGGCAACCAGTTAAAGGAAGGAAAAGGTGCCATGAGCACAAAGGGAGGAGAATAGGTGCATCTATTAAAAAAAAGGGCAATGGATACAGATACCAAAATGTCAGCTATGATGTAGAAGATCCTCTACAAACACTGGTAGGTAGTCCTGCTGTTGAGAGTATATCAAACACAAATATATGTGGAATCATCTTAAATGATGGCTCTACCTGTACAAGGCAAGCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGGAGAACTCGTGCATCTTTTCATGTAAATCAGAAATAA 1398 0.4299 MVTLAITRLKREQCNRTKHDSSFSRWKILIGPSDWEDHSKGKEGCARYRIHNLPQESSPGVYELGIAVSSGGLGRQISKLGRHPDRIVVVYLGQADNVRTRLQRYGRTGAHLDSGCSDDSSLQKGRPLFQEVFSQGFSIVYRWAPMQNKEDALRTESQLLSTFDYAWNTSNNGIRRPEEILQKLQKIASGSITLSDVTRALLPFTQKQVGIRIKSSKLPQADHKLDEADNGNHNFLSRVFSFNRSRPRIVQSITDVTQEQENAKICGVALGDGLICRRPPAEKRLRCPEHKGMRANASIAEPITVPKSENNVVLEPDVCCQTKGNEYRYQNDSHEDPPQTVIGSPVDESLTNTNICGIILNEGFTCRRQPVKGRKRCHEHKGRRIGASIKKKGNGYRYQNVSYDVEDPLQTLVGSPAVESISNTNICGIILNDGSTCTRQAVKGRKRCHEHKGRRTRASFHVNQK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02583 465 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 346 399 IPR038909 GO:0003677|GO:0006355
Spst4g02583 465 Pfam GIY-YIG domain-containing protein 23 181 - -
Spst4g02583 465 SMART uri_9 70 173 IPR000305 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02583 346 464 HRT Transcription Factor Family AT5G56780 37.705 2.19e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Spst4g02583 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02583 - - gmx:100784450 601.668