Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02578 ATGAATTACCACCTTCGCTTTGAGGATGCTGGCGAGGCTGTGGACGAGAGTTCTAACCTCGACGAATCCATGTGTGACATCGAGGAATCTGATGATAAAACCAGTGCTGACTATTATTTTGATTCCTACTCTCATTTTGGAATTCATGAAGAGATGTTGAAGGACACTGTAAGAACTAAGACATATCAAAATGTTATATACCAGAATAAGTTTCTGTTCAAGAATAAAGTAGTTCTTGATGTTGGAGCTGGGACTGGGATTTTGTCTCTATTCTGTGCCAAAGCGGGGGCAGAGCATGTCTATGCCGTTGAGTGCTCCCATATGGCTGACATGGCAAAGGAGATTGTTGAAACTAATGGTTTCTCTAATGTTGTCACAGTTCTGAAAGGGAAGATTGAAGAAATTGAGCTTCCAGTTGCTAAAGTTGACATAATCATCTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGAGATAAATGGCTTGCGGAAGATGGAGTTGTGCTACCAGATAAGGCATCCCTCCATCTCACTGCCATTGAAGATGCAGACTATAGAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTAACATGAGCTGCATCAAGAAGCAAGCAATAATGGAGCCTCTTGTTGACACAGTCGACCAGAATCAGATTGCTACGAACTGTCAACTACTCAAGACAATGGATATCTCAAAGATGGCACCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTTGTAGCCGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTGATGTATCATTCACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAAATCACGAGCCACACATTGGAAACAAACAGTCCTATATCTAGAAGATATCTTGACCATTTGTGAGGGGGAGGCAATTATAGGGAGCATGACTGTTGCACCAAATAAGAAGAACCCTCGGGATGTTGATATAATGCTTAAGTATTCTTTGAATGGAAATCGATGCAATGTTTCAAGGGTTCAATACTACAAGATGCGTTGA 1074 0.4022 MNYHLRFEDAGEAVDESSNLDESMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGFSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLAEDGVVLPDKASLHLTAIEDADYREDKIEFWNNVYGFNMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPKSRATHWKQTVLYLEDILTICEGEAIIGSMTVAPNKKNPRDVDIMLKYSLNGNRCNVSRVQYYKMR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02578 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 42 356 IPR029063 -
Spst4g02578 357 CDD AdoMet_MTases 78 178 - -
Spst4g02578 357 FunFam probable protein arginine N-methyltransferase 1 27 179 - -
Spst4g02578 357 Gene3D - 181 357 - -
Spst4g02578 357 Gene3D Vaccinia Virus protein VP39 27 179 IPR029063 -
Spst4g02578 357 FunFam Blast:Protein arginine N-methyltransferase 1 181 357 - -
Spst4g02578 357 Pfam Ribosomal protein L11 methyltransferase (PrmA) 72 148 - -
Spst4g02578 357 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 26 344 IPR025799 GO:0016274|GO:0018216
Spst4g02578 357 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 36 337 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02578 Spst-Chr4 65808539 65811229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02578 39 320 C2H2 Transcription Factor Family AT3G12270 39.803 1.41e-64 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02578 K11434 - gmx:100781777 693.345