Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02568 ATGGCTAGTTCGATTGGGTCCTTATTATTTCTGACACTTTGTGTTGTCCTCGTAGCTTTAGTTCATGCACAGCAACAAATAGGCTTCATAAGCATTGATTGCGGTGGTCCACCCAATCTTGAGTACACAGATCCTGTAACTAAAATAAAGTACACCACTGATGGAGCCTATATACAAAGTGGGGTTAATAAGAACATCTCCTCCGAGTATGCGTACCCAAAGAATCCTAATCTGCCAGAAATACTCTCAGATCTCAGAAGTTTTCCCTACGGAGAAAGGAACTGTTACAGTTTATCTGCTGTAAGAAGACGCGGTTTATATTTGATAAGGGCTTCCTTCTTGTATGGAAACTATGATGGAGAAAACAAGCCTCCAGAGTTTGATCTCTACGATGATGTCAATTTCTGGGCAACAGTGAAATTTAGAAATGCCTCGGAGGAAGTTACAATTGAAATAATCAGTTTGGCCCAATCAGATGTGAGCCATGTGTGCCTTGTGAACAAGGGAACAGGAACTCCTTTTATCTCAGGATTGGAGATTAGACCACTTAATAGTTCTATTTATAACACTGAGTTTGGGGAATCTGCTTCACTGGCACTTTTCAAACGATGGGACATTGGGTCACTTAATGGAAGTGGTAGATATGAGGATGATATTTATGACAGAATTTGGTCCCCTTTAAATTCTTCATCCTGGGATTCTGTCAGCACTTCCACGCCAATAAATGTCAATGATGATGGCTTTAGACCACCATTTGAAGTAATTAGGACTGCTGCTAGACCAAGGAATGGCAGTGATACTTTGGAGCTTTCCTGGACCCCAGATGATCCAAATTGGAAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAGCAACTTGAGAAAACCCAGCTGAGGAAATTCAATATATCTTGGAATGGATCTCCATTGTTTGATTCCATAGTACCACGCCACTTGTTTGCAACCACTCTTTCTAATTCAAAATCCTTGGTGGCAAATGAACATCGTATTTCCATACGTAAAACAGAAGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGATTTATGTAGTGAGACAGCTTGATGCACTAGCAACATTTGCACAAGATGTTGATGCTATGTTCGATTTAAAGGATAGCTACAGAATTCAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACCTCTCTTGGGAAGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCCCGAATTATATCTCTGAATATGAGCTCCAGCAGTTTGAGTGGAACAATAACTTCTTCCATTTCCAATCTCTCCTCGTTGGAATCTTTGGACTTACACAACAATAGCTTAACTGGAGCAATGCCTCAGTTCTTGGAAGAATTGAAATCCCTTAAATATTTGGATTTAAAGGAAAATCTACTTTCGGGTTCAGTTCCTGTCTCTCTTTTAGAAAGACAAAGCGATGGATTACTTACATTGAGGGTCGATGATCAAAATCTTGGTGACTCAGGAGGGAACAATAAAACCATTAAAATTGTTATTCCCATAGTGGTATCAGTATCAGTTTTGGTTGTATTGGTTGCTTTCATTCTCTTTTGGAAACTTGGAAGAAAGGAACGATCAGACGAGGAGATCAGTATGCTCAACAAAGGTGGAAAAACTGTAACAACGAAGAACTGGCAATACACGTATTCAGAAGTCTTGGGCATCACCAACAACTTTGAAATGATCATTGGTAAGGGAGGATTTGGAAATGTGTATCGTGGGAATATGAAAGATGGCAAAGAAGTTGCAGTTAAGATGCTTTCTCCGTCATCATCTCAGGGGCCGAAAGAATTTCAGACTGAGGCTGAGCTTTTGATGACAGTTCATCACAAAAACTTGGTATCCTTTGTTGGTTATTGTGATGATGATAACAAGATGGCTCTTATATATGAGTACATGGACAATGGCAGCCTGAAAGATTTTCTCTTCCTCTCAGATGGAAATTCACATTGCTTGAGTTGGGAAAGGAGAATACAGATTGCAATCGATGCTGCTGAGGGATTGGATTACCTACACCATGGTTGCAAGCCACCAATAATACACAGGGATGTAAAGTCAGCAAACATTCTTTTAAGTCAAGACTTAGAAGCTAGGATAGCAGATTTTGGCCTCTCCAGGGAGTTTAGGAAAGATAACCAAAAACAAGAATCCAAAGTGATTCATAATGTTGCTACAAATGACAAATCTGCAGTAATGGGGACAACAGGGTACCTTGACCCAGAGTACTACAAATTAGGGACCCTGAATGAGAAAAGTGACATCTATAGCTTTGGAGTTGTTCTGCTTGAATTAATCACAGGTCGCCCTGCAATATTCAAAGGCACCAGAGTAATGCACATACTTGAGTGGATAAGACCTGAGCTTGAAAGAGGAGAATTGAGTAGAATTTTGGATCCAAGGCTCCAAGGAAAATTTGGTGCAAGTTCTGGGTGGAGAGCTGTAGGAATAGCAATGGCATGCTCTGCATCAACTTCCATTCAGAGACCTACAATGAGTGTTGTCATAGCAGAGTTAAAACAGTGTCTAGCATTGGAATCTCCCTGTGACACTGAAACATTTGTGCCCCCTCCAAAACAAGTCTACACAGAATTCTACAGTTCATCTGAAACATATTCTTATGATAGTGAATCTACCACCTATCCTTTCCCAAGATAG 2697 0.4034 MASSIGSLLFLTLCVVLVALVHAQQQIGFISIDCGGPPNLEYTDPVTKIKYTTDGAYIQSGVNKNISSEYAYPKNPNLPEILSDLRSFPYGERNCYSLSAVRRRGLYLIRASFLYGNYDGENKPPEFDLYDDVNFWATVKFRNASEEVTIEIISLAQSDVSHVCLVNKGTGTPFISGLEIRPLNSSIYNTEFGESASLALFKRWDIGSLNGSGRYEDDIYDRIWSPLNSSSWDSVSTSTPINVNDDGFRPPFEVIRTAARPRNGSDTLELSWTPDDPNWKFYVYLYFAEVEQLEKTQLRKFNISWNGSPLFDSIVPRHLFATTLSNSKSLVANEHRISIRKTEDSTLPPILNAVEIYVVRQLDALATFAQDVDAMFDLKDSYRIQRNWVGDPCEPKNLSWEGLKCNYSTSLPPRIISLNMSSSSLSGTITSSISNLSSLESLDLHNNSLTGAMPQFLEELKSLKYLDLKENLLSGSVPVSLLERQSDGLLTLRVDDQNLGDSGGNNKTIKIVIPIVVSVSVLVVLVAFILFWKLGRKERSDEEISMLNKGGKTVTTKNWQYTYSEVLGITNNFEMIIGKGGFGNVYRGNMKDGKEVAVKMLSPSSSQGPKEFQTEAELLMTVHHKNLVSFVGYCDDDNKMALIYEYMDNGSLKDFLFLSDGNSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDLEARIADFGLSREFRKDNQKQESKVIHNVATNDKSAVMGTTGYLDPEYYKLGTLNEKSDIYSFGVVLLELITGRPAIFKGTRVMHILEWIRPELERGELSRILDPRLQGKFGASSGWRAVGIAMACSASTSIQRPTMSVVIAELKQCLALESPCDTETFVPPPKQVYTEFYSSSETYSYDSESTTYPFPR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02568 898 CDD STKc_IRAK 577 854 - -
Spst4g02568 898 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 647 865 - -
Spst4g02568 898 Gene3D Transferase(Phosphotransferase) domain 1 648 865 - -
Spst4g02568 898 SUPERFAMILY Protein kinase-like (PK-like) 557 891 IPR011009 -
Spst4g02568 898 ProSiteProfiles Protein kinase domain profile. 571 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02568 898 FunFam Leucine-rich repeat receptor-like kinase 370 501 - -
Spst4g02568 898 Pfam Malectin-like domain 32 358 IPR024788 -
Spst4g02568 898 FunFam Leucine-rich repeat receptor-like protein kinase 549 646 - -
Spst4g02568 898 Gene3D Ribonuclease Inhibitor 362 488 IPR032675 -
Spst4g02568 898 PANTHER OS07G0107800 PROTEIN-RELATED 30 859 - -
Spst4g02568 898 Pfam Protein tyrosine and serine/threonine kinase 574 797 IPR001245 GO:0004672|GO:0006468
Spst4g02568 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Spst4g02568 898 SUPERFAMILY L domain-like 395 484 - -
Spst4g02568 898 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Spst4g02568 898 Gene3D Phosphorylase Kinase; domain 1 577 647 - -
Spst4g02568 898 SMART serkin_6 571 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02568 898 Pfam Leucine rich repeat 417 473 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02568 Spst-Chr4 65755983 65760858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02568 2 859 Receptor kinase-like Gene Family AT4G29180 51.716 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst4g02568 Malectin_like 1e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02568 - - gmx:100793137 1477.23