Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02536 ATGTCAGGACAAGTACCTAATCAATCAGGGTCTCAATTGTCTGGACTGACCCAACTGAATGGGAATGCACTCCCTCATCAGATGCCACCTTTAGGGGGTGTACCCCGGTCAACAATTAATACGGATCCTGAATTTCTTAGAGCTCGTACTTTTATTCAAGAGAAGATATTTGATATGTTGTTGCGAAGACAACAGCAGCCAGTTACAGATGTACAGAGAAGGAAGCTTAAGGATCTTGCAAAACGCTTGGAGGAGGGCATGTTAAAAGCTGCTCTGTCTAAGGTTTCTTCTGGCCTTCTAGAGGATTACATGAACTTGGACACCCTGGAGAGTCGTTTATCAAATTTCCTCCGACGAGCATCGATGAGTAATCACAACCAACAATATCCGCAGCTTGTTAACTCTTCTCCAATCGGTACAATGATACCAACCCCTGGTATGTCACATGTTCCAAATTCAAGCATGATGGTTGCATCTTCTGTGGATGCCTCAATGATTTATGCCAGCGGGTGTAATAGCATAGCTTCAACATCTTTCAATAGTGTAAACATGTTACCAGCTGGTGGCATGCTTGGCAGTACCTTAAATAGATTTGATGGTTTATCTAATGGTTATCAGCAGTCTTCTACCAGCTTTTCTGTTGCCTCAGGGGAGAACATTTCATCAATGGGGGTGCAGAGAATTGCTAGCCAGATGATTCCCACTCCTGGATTCTCAGTCAGCAGTAGTCACTCACACATGAACATAGATTCTAATACTAATGGAGGTGCCATTTCCAGTGTAGAGTCTACTATGGTACCACTGTCGCAACTTCAGCAGCAGAAGCATCATGTTGGTAGCCAAAATAGTCATGTATTGCAGAGCCTCAACAGTCAAATGGGTAATGGAATGAGACCTGGTTTACTACAGAAGCCATTTACAAACTCAAATGGTGCTATAAATAGTGGTTCAGGCTTAATTGGAAACAATATACAACTTGCTAATGAACCAGGCACTTCTTCTGACAGCTATGCCCCCACTTATGCAAATTCCCCTAAACACATGCACCAGCACTTTGATCAAAATCAGAAACCAGTAGTTCAAGGTGATGGATATGGATTGAATAATGTTGACAATTTTCCGTGTGGAAACTTCTACACGTCTGCAACATCCTCTGGGTCTATGATAAACAATCAGAACACTAGTTCAGTTAAATTACCATCAATGCCTAAAACTAGTTCATTGTTAAGTGGTCACTCGAACTTGCATGGTATCCAGCAGGTTGCTCAGATAAAGTCTCAATCAATTAACCAGTTAGAAAAGTTGAATTTTCAGTCTTCGATGATTTCAAGGGATGGCCTTCTGCATTCTCAACAGCAATATCAGCAAAGGTCTCAACAAGTGCAGCAGCCAGATCAGTATGCACAGCAGCAATTTCAATCTATGCAAGGTCAACAGCCTCAGCATGTGGTCAACAGTGACTCATTCAGTCATTCTCAGCTTTCTCCCAATGTAGAAAGAGTGAAGCCTGAACCTGGAATTGAACACCATAAAGAATTGTTCAATTCTCATGTCTCCGAACAGTTTCACATATCTGAGATGCAGAGTCAGTTCCAGCAGAACTCATCTGAAGATTGTTCTAGAGGTTCTCAACATCTTCCATTCTCATCTGGTCACCATGATTTACCATCATCAATGCCTCAAAATTCGCAACCAATCTTGCACCCACATCAATTGGTTGCTGAATCTCAAAATAATTTTAGCTGTTTTACAGTTGGGGCACAATCCAAATCTGTAGTTCTAAGCCAATGGCCTCAATCACAAGATTGTAACCACACGCCTGACGGTATTGCACATGATCAACATCTCCGCATGGATTTTCATCAAAGAATATCTGTACAAGATGAAGCTCAATGCAATAATTTATCATCGGATGGATCAATTACTGGTCGTGCTATTCTTTCTAGAGGCTCAGCTGAGCAGCTTGAATCTGGAATTGCCATAAAAAAGGCACACAGGAATCAACAGAAGTGGCTTTTGTTCCTACTTCATGCTCGAAGATGTTCTGCTCCTGAAGGACGATGCAAAGAACGGTTTTGCTCTATTGCACAGAAGTTGTGCAAGCACATAGATGGATGCAAACTGAGCCATTGTCCATATCCTCGTTGCCATCATACCAGGGAGTTGATTCATCATTTCATAAACTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTGAGAAAGTATCGACGTGCTTTTCAATTCAAGCCTCAGATTCGGCCAGGACCTGAACCAAGCTTGTCTACTGCAATGACTGGATCCTGTAAACCTTACAATATTACAGGCACATCACCAAGATTGATCTCAAAGCCTCCATTAGTTGAAACTTCAGAGGAATTGCATCCATCTATAAAACGTGTAAAGATTGAGCATTGTCCCCAGTCCATTAATCCTGAAAATGGCCATTCTGCTTCATCTTTTACTGCAAATTGTGAATCACTTGTTTCCAAGGATGCTCAGTCTCTACTCCAACCCTATCCTAATGCTGAGAAGTCTATCTCAATTAAACCTGAGTTAACAGAAGTTAAGGCTGAAGCTTCTGCACATGCAGTACATGAAAAGCTTAGTGAGATGAAAATGGATAACAATAATGCTGATGATAAAATGCCTAGTGCTGAACCTGTCCAATATGATGAACCTGCTAATTTAGCTAGGACTGAAAACATAAAAACTGAGAAAGAAACTGGACAAGATCGGCAAGAAAATGTTGTGCAGCCATCTGAATTTTCAGCTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGGTGTCTCATTAACTGAGCTATTTACTCCAGAGCAAGTCAGGGAACATATCACCGGCCTCAGACAATGGGTTGGTCAGAGCAAGTCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCATGTCAATTGTGTGCTGTAGAGAAGCTTACCTTTGAACCACCACCTATTTATTGCACAATTTGTGGGGTTCGCATTAAACGAAATCATATGTATTATACAACGGGCACTGGTGATACACGACATTATTTTTGTATTCCATGCTATAATGATGCTCGTACAGAGAACATCGTTGTTGATGGGACGCCCATTGCCAAGTCAAGATTGGAAAAGAAGAAGAACGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAGTGTGAAGCATGGCAACATCAAATTTGTGCCTTATTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAACTGTTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTTGGCGCCAAGGATTTACCAAGGACAATTCTTAGTGATCACATAGAACAGCGACTATTTAGACGGTTAAAGCAAGAAAGGCAAGAAAGGGCAAGGTTTCAAGGAAAAAGTTATGATGAGATTCCAGGAGCTGATGCTCTTGTTATAAGAGTTGTGTCATCTGTTGACAAAAAGTTAGAAGTGAAACCACGGTTTCTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCGTATAAATCAAAGGTAGTTTTGTTGTTTCAGAAGATAGAAGGTGTGGAAGTTTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTTCCTAATCAGCGGCGTGTGTATCTTTCATATTTGGATTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACGGGAGAGGCACTTCGGACTTTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTCACAAGCTGCTATATATGGGCTTGTCCTCCATTGAAGGGTGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCCAAATCAGATAAGCTACGTGAATGGTATCTATCCATGTTAAGAAAAGCTTACAAGGAGAATATTGTTGTTGATCTCACCAACTTATACGATCATTTCTTCGTAACTACTGGTGAGTGTAGGGCTAGGGTTACTGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTAATCTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAGGGAACAACTAAGAAGACTATAACAAAAAGGGCATTAAAAGCTTCTGGTCAGTCAGATCTTTCAGGAAATGCTTCGAAGGATCTGCTCCTCATGCACAAAGTTGAAATTACTGATGTTCCATCTGATACAAAGGACAAAGATGATATTCTTGAGAGCGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGCGGGCCAAGCATTCATCAATGATGGTCCTCTATCATCTTCATAATCCAACAGCTCCAGCATTTGTGACAACTTGTAACATATGTTATCTTGACATCGAAACGGGTCAAGGATGGCGCTGTGAGGTTTGCCCTGAGTACGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGTATTGATCATCCTCATAAGTTGACAAATCATCCATCCATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAACATCGAGTATCGCAGCTACGGAAAATGCTTGATCTCCTTGTCCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCCAATTGTCGCAAGGTAAAGGGGCTTTTCCGCCATGGGATGCACTGCAAAACACGGGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAATCTGATTCACGGCGTAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCGGCAGAAGTTGCTAACAATGCGGGTTGA 4971 0.415 MSGQVPNQSGSQLSGLTQLNGNALPHQMPPLGGVPRSTINTDPEFLRARTFIQEKIFDMLLRRQQQPVTDVQRRKLKDLAKRLEEGMLKAALSKVSSGLLEDYMNLDTLESRLSNFLRRASMSNHNQQYPQLVNSSPIGTMIPTPGMSHVPNSSMMVASSVDASMIYASGCNSIASTSFNSVNMLPAGGMLGSTLNRFDGLSNGYQQSSTSFSVASGENISSMGVQRIASQMIPTPGFSVSSSHSHMNIDSNTNGGAISSVESTMVPLSQLQQQKHHVGSQNSHVLQSLNSQMGNGMRPGLLQKPFTNSNGAINSGSGLIGNNIQLANEPGTSSDSYAPTYANSPKHMHQHFDQNQKPVVQGDGYGLNNVDNFPCGNFYTSATSSGSMINNQNTSSVKLPSMPKTSSLLSGHSNLHGIQQVAQIKSQSINQLEKLNFQSSMISRDGLLHSQQQYQQRSQQVQQPDQYAQQQFQSMQGQQPQHVVNSDSFSHSQLSPNVERVKPEPGIEHHKELFNSHVSEQFHISEMQSQFQQNSSEDCSRGSQHLPFSSGHHDLPSSMPQNSQPILHPHQLVAESQNNFSCFTVGAQSKSVVLSQWPQSQDCNHTPDGIAHDQHLRMDFHQRISVQDEAQCNNLSSDGSITGRAILSRGSAEQLESGIAIKKAHRNQQKWLLFLLHARRCSAPEGRCKERFCSIAQKLCKHIDGCKLSHCPYPRCHHTRELIHHFINCKDPCCPVCVFVRKYRRAFQFKPQIRPGPEPSLSTAMTGSCKPYNITGTSPRLISKPPLVETSEELHPSIKRVKIEHCPQSINPENGHSASSFTANCESLVSKDAQSLLQPYPNAEKSISIKPELTEVKAEASAHAVHEKLSEMKMDNNNADDKMPSAEPVQYDEPANLARTENIKTEKETGQDRQENVVQPSEFSAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTICGVRIKRNHMYYTTGTGDTRHYFCIPCYNDARTENIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARFQGKSYDEIPGADALVIRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAYKENIVVDLTNLYDHFFVTTGECRARVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMVDRDAQNKEARQHRVSQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02536 1656 SMART KAT11_2 1146 1426 IPR013178 GO:0004402|GO:0006355|GO:0016573
Spst4g02536 1656 Gene3D - 1477 1531 IPR043145 -
Spst4g02536 1656 MobiDBLite consensus disorder prediction 448 497 - -
Spst4g02536 1656 Pfam Histone acetylation protein 1153 1376 IPR013178 GO:0004402|GO:0006355|GO:0016573
Spst4g02536 1656 SMART TAZ_2 1541 1619 IPR000197 -
Spst4g02536 1656 SMART TAZ_2 662 740 IPR000197 -
Spst4g02536 1656 MobiDBLite consensus disorder prediction 869 932 - -
Spst4g02536 1656 Pfam Zinc finger, ZZ type 1480 1519 IPR000433 GO:0008270
Spst4g02536 1656 MobiDBLite consensus disorder prediction 1 24 - -
Spst4g02536 1656 FunFam Histone acetyltransferase HAC1 1477 1528 - -
Spst4g02536 1656 CDD PHD_HAC_like 1023 1095 - -
Spst4g02536 1656 Gene3D TAZ domain 1535 1652 IPR035898 -
Spst4g02536 1656 ProSiteProfiles Zinc finger TAZ-type profile. 660 740 IPR000197 -
Spst4g02536 1656 SMART PHD_3 997 1096 IPR001965 -
Spst4g02536 1656 SMART zz_5 1477 1523 IPR000433 GO:0008270
Spst4g02536 1656 Pfam TAZ zinc finger 669 737 IPR000197 -
Spst4g02536 1656 Pfam TAZ zinc finger 1548 1618 IPR000197 -
Spst4g02536 1656 SUPERFAMILY RING/U-box 1459 1527 - -
Spst4g02536 1656 ProSitePatterns Zinc finger ZZ-type signature. 1483 1510 IPR000433 GO:0008270
Spst4g02536 1656 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1113 1476 IPR031162 GO:0004402
Spst4g02536 1656 Pfam PHD-finger 1054 1096 IPR019787 -
Spst4g02536 1656 ProSiteProfiles Zinc finger TAZ-type profile. 1537 1621 IPR000197 -
Spst4g02536 1656 SUPERFAMILY TAZ domain 1540 1623 IPR035898 -
Spst4g02536 1656 ProSitePatterns Zinc finger PHD-type signature. 1024 1095 IPR019786 -
Spst4g02536 1656 MobiDBLite consensus disorder prediction 1 36 - -
Spst4g02536 1656 Gene3D TAZ domain 658 745 IPR035898 -
Spst4g02536 1656 SUPERFAMILY TAZ domain 665 744 IPR035898 -
Spst4g02536 1656 PANTHER CBP/P300-RELATED 78 1647 IPR013178 GO:0004402|GO:0006355|GO:0016573
Spst4g02536 1656 MobiDBLite consensus disorder prediction 527 562 - -
Spst4g02536 1656 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1048 1096 IPR013083 -
Spst4g02536 1656 ProSiteProfiles Zinc finger ZZ-type profile. 1478 1531 IPR000433 GO:0008270
Spst4g02536 1656 MobiDBLite consensus disorder prediction 899 913 - -
Spst4g02536 1656 MobiDBLite consensus disorder prediction 448 500 - -
Spst4g02536 1656 SUPERFAMILY FYVE/PHD zinc finger 1057 1097 IPR011011 -
Spst4g02536 1656 FunFam Histone acetyltransferase HAC1-like protein 1535 1652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02536 Spst-Chr4 65446821 65459461 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Spst4g02536 HAT_KAT11 5.1e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02536 K04498 - gmx:100787114 2521.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02536 4 65446821 65459461 Spst4g02536 4 65446821 65459461 ECH