Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02529 ATGAAGCATGAGGAAGAATTCAGGAAAACTGATGGAGCTAACAAGGTTGATGAGTACCTCTATGGAAGCTTTATTGATTGCCTAACTGAATTGTGCCACGCTTCAGTTGATGACATAAAAATAGCTGGTAGCAATGCCTGCGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTGAATATGGAGATGGCTAAACTGGCTTTTCGCAAGGGCATATGGAGCTATATATGCAAGATGGATAATGCACTTCGAAGATACTCTGTTGTAAACTATCATTTATCAAATTCAGTTACCACTTCAGTTAATTTAATGCAGAAGGTACCGGCTTGCTTGGACCCTATCACGAGTAACATATCTCCAGGACATCCTACCGTCTTCCATGATCAATTTACTGATGAATCTCAAAAGCGGGTGATCCTAAGAAGGCCATCTAGAAAGTTTCTAGCCAATAGTTTGCTGCTTCTAGGAGGTGCTACTGCTATATGCCTGTCTCGTAGTCATTCTAGCCTAGGTGTTAAAGTTGCCATGGCATACATTTTAACAAAACTTATAGCCTGCGTTGATAGTGAGTTGTCTTTCTTTGTTTGGGGTTTGGTTGTTGTTGGAATGAAAATGCACCACAACCTTATCCTTGCAAGGTTGTGGCTTGCTTTGCTTGCGGTCTCAACCACCTCAGTTCATTGCAAAACCTCCTCCGAAGATGTCTCAGCCCTTAATGCGATGTATTCCAGCTTAAATTCCCCTTCAAAGCTTAGTGGTTGGAAATCAAGTGGAGGTGATCCTTGTGGTGACTCATGGGAAGGAATTAAATGCTCAGGCTCTTCTGTCTCAGAAATAAATTTGTCAGACATGGGACTCACTGGATCAATGGGCTACCAGTTGTCCAGCTTATCATCATACAGTGATTTGAGCAACAACAACCTCAAGGGTGATATACCATATCAACTTCCTCCAAATGCTCGTCATATGCAACCTGCATTTGATTGGCGTCGTATGTTTGTCAACAATAATTCTGTTATCTGGTCATGCAGAGATCTTTCTAAGAATTCCTTCACCGGAAGTATACCTTATTCCTTTTCTCAGATGGGTGACCTCAACTACCTAAATCTTGCACATAATCAGCTTAAAAACCAGTTGGGAGAAATATTTGACAAGCTCAGTAAACTCAAACAACTGAATGTCGAAAACAACAAATTTACTGGTTGGATTCCTGACGAGTTGAAGAATATAAAGAAATTGCAAACTGGAGGAAACTCATGGTCAAGGGGAGAAGCACCTCCTCCTCCTCCTGGTACTCCCCCTATCAACGATTCCAAGAAAAAGAAAGATAAACAGGTTATTGGTGGAGTAGCTATAGCAGCCATAGTTTTTGGCATACTGGCAGTAATTATAATTGTTCTTGCTGTTTGTAAAAGAAGGTCGTCGACATCTTCTTCACACTTTATCGATGAAGAGAGGCGTAGCCAGAATAAATCTTTAACACCCCATGCATCTCAGGAGTTATCAAAAGTTTCGGATTCTGATGTCAACAAAGAATTCAAAGGATTTAACTCATTGCGTTCCACATCAATTGACGTAAAGGCTTTGCAAAAATCTCCGTCAATTAGTGTTAGATCGTCAGTCTCCGATTGTGTGCAATCCTTTAACAACAATGAGTTTGCGAATCGTCTAAATTCTAGAAGTACATCATTCCGTGCTACTACTTTTTCACTGGAAGAGTTGCACTCTGCTACTGCTAATTTTGCTTCAGGTCGACTCCTTGGTGAAGGATCCATAGGATGCGTTTATCGAGCTAAATATGCAGACGGAAAGGTATTGGCTGTAAAAAAAATCAACCCTTCGCTTTTCCATGGTAATCCTACTGAGGAATTCTCTCAGATTGTTTCAAACCTCAGCCAAATTCGCCACCCAAATATCGTTGAGCTTGTCGGTTATTGTTCAGAACAGGAGCACATGTTAATATATGATTATTTCAGAAACGGTTCTCTCCATGGCTTTTTACACTTATCAGACGATTTCAGCAAACCACTCACTTGGAACACAAGAGTCAGAATTGCATTGGGAACAGCTCGGGCTATTGAGTACCTCCATGAAATTTGTTCTCCTCCTATCTTGCATAAGAATATCAAGTCCTCGAATATTTTTCTTGACACGGATCTGAATCCTCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGTAGGATATAATGCACCAGAATGCACAAAACCTTCAGCCTTTACACAGAAAAGTGATGTATACAGTTTTGGGGTAGTGATGCTGGAACTTTTGACGGGTCGAATGCCTTTAGACAGTTCAAGGCCGAAGGCAGAACAATGTCTTGTTCGTTGGGCAACCCCACTTCTTCACGACATTAATGCGGTGGAGAAAATGGTGGACCCTGCCTTGCGGGGGCTTTACCCTCCTAAGTCACTCTTCCGATTTGCTGATGTCATCGCTCTCTCTGTTCAGTCTGAGCCTGAATTTCGGCCACCTGTGTCAGAGTTAGTTCAGGCTTTAGTGAGATTAGTTCAGCGCCCAAGTATGACAATGAGGGAGGATTTTGAGTGA 2595 0.4189 MKHEEEFRKTDGANKVDEYLYGSFIDCLTELCHASVDDIKIAGSNACEITMFHQEDAGLNMEMAKLAFRKGIWSYICKMDNALRRYSVVNYHLSNSVTTSVNLMQKVPACLDPITSNISPGHPTVFHDQFTDESQKRVILRRPSRKFLANSLLLLGGATAICLSRSHSSLGVKVAMAYILTKLIACVDSELSFFVWGLVVVGMKMHHNLILARLWLALLAVSTTSVHCKTSSEDVSALNAMYSSLNSPSKLSGWKSSGGDPCGDSWEGIKCSGSSVSEINLSDMGLTGSMGYQLSSLSSYSDLSNNNLKGDIPYQLPPNARHMQPAFDWRRMFVNNNSVIWSCRDLSKNSFTGSIPYSFSQMGDLNYLNLAHNQLKNQLGEIFDKLSKLKQLNVENNKFTGWIPDELKNIKKLQTGGNSWSRGEAPPPPPGTPPINDSKKKKDKQVIGGVAIAAIVFGILAVIIIVLAVCKRRSSTSSSHFIDEERRSQNKSLTPHASQELSKVSDSDVNKEFKGFNSLRSTSIDVKALQKSPSISVRSSVSDCVQSFNNNEFANRLNSRSTSFRATTFSLEELHSATANFASGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLFHGNPTEEFSQIVSNLSQIRHPNIVELVGYCSEQEHMLIYDYFRNGSLHGFLHLSDDFSKPLTWNTRVRIALGTARAIEYLHEICSPPILHKNIKSSNIFLDTDLNPRLSDYGLASFHQRTSQNLGVGYNAPECTKPSAFTQKSDVYSFGVVMLELLTGRMPLDSSRPKAEQCLVRWATPLLHDINAVEKMVDPALRGLYPPKSLFRFADVIALSVQSEPEFRPPVSELVQALVRLVQRPSMTMREDFE 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02529 864 MobiDBLite consensus disorder prediction 415 441 - -
Spst4g02529 864 Pfam Protein tyrosine and serine/threonine kinase 584 848 IPR001245 GO:0004672|GO:0006468
Spst4g02529 864 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 658 862 - -
Spst4g02529 864 Pfam Leucine rich repeat N-terminal domain 232 272 IPR013210 -
Spst4g02529 864 Gene3D Phosphorylase Kinase; domain 1 541 657 - -
Spst4g02529 864 ProSiteProfiles Protein kinase domain profile. 581 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02529 864 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 216 851 IPR046959 -
Spst4g02529 864 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 546 657 - -
Spst4g02529 864 Gene3D Transferase(Phosphotransferase) domain 1 658 862 - -
Spst4g02529 864 SUPERFAMILY Protein kinase-like (PK-like) 557 848 IPR011009 -
Spst4g02529 864 Gene3D Ribonuclease Inhibitor 233 324 IPR032675 -
Spst4g02529 864 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 231 329 - -
Spst4g02529 864 Pfam Leucine rich repeat 345 399 IPR001611 GO:0005515
Spst4g02529 864 MobiDBLite consensus disorder prediction 478 504 - -
Spst4g02529 864 Gene3D Ribonuclease Inhibitor 342 426 IPR032675 -
Spst4g02529 864 SUPERFAMILY L domain-like 229 413 - -
Spst4g02529 864 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02529 Spst-Chr4 65354471 65368507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02529 211 863 Strubbelig Receptor Gene Family AT1G78980 53.521 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst4g02529 PK_Tyr_Ser-Thr 8.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02529 - - gmx:100785529 880.552