Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02527 ATGAGGCTTGCCAGTACAAAGGCATCAATACATAAATGGGGAGGTGGAAATGGATTGGTGGCTGTTGCTGTAGAAAAGGATGATAAAAGGAGCCGAAACGCTGTCAAATGGGCTGCTGATACTCTTCTTTCCAGAGGCCAAATTCTTGTTCTAATCCACGTTTTGTATCCAACCTCCTCATCTCTTTCCAGAGGCAGCCAAGCCATAGTGTGCAACACCAACTGCCCAACTGCATCTCCCCAGAGAGACAAACTTGTCAACATTACGAAGGAGCTATTTTGCACCTTTCATTGCTATTGTACACGCAAAGATATACAATGCCTTGATGTCGTTATTGAAGACATGGACATCGTGAGAGGAATAACTGAATATGTCTCTCATGCTGCAATTGAGCATTTGGTGCTTGGTGCAGCCTCCAAGCATGGCTTTATTAGATTCAAGTCAAGTAGTACACCAAACAGCATATTAAAGGGGGTGCCCGATTTCTGTAGTGTGTATATCATTTCTAAGGGGAAAATCTCTTCGGTTCGGAATGCTGCTCGAAAGGCCTCACATGCCTCCCCACTGCTGAGGCATATAGAGACTCAAAATGATGAGAATGGAAATGAATCTGATGTATCTTCTAGACGTTTGAGCTTCAAAGACACCAGGGTAGCACTCAGGCAGTCCACTTGGCAGGGTGAATCCATGAAAAAATTTGGGCTGAGTGGAAGATCAGGCATAGACTACGCCGAATCTGACACTGACATATCATTTGTGAGCTCTGGTAGGCCCAGCAGTGTACGCTCAACCTCAGTTTTCTATGAGTATGGTGATCATGGCCGAAATTCACGAACTTCAACCAGCTCAGATCGTAGCATGGGGTCAACATGGATGAAACTCAAGCACACTGACCCCAATTCACCGGACCTTTCATTTTCAGAGGAAAGCAGCCGTTCATCATTTTCTAGTTCGTTACAAAACATTGACGAAGTAGAAGCTGATATGAGGAGGTTGAAGCTGGAGTTAAAGCAAACAATGGAAATGTACAGTGCTGCATGCAAAGAAGCACTAACAGCGCAACAGAAGTTAGGGGAAATGCACAGCTGGAAAATGGAGGAAGAAAAGAAATTAGAGGAGGCACGGCTGTCCCACGAAGCAGCAGACGCAATTGCAGGGAAAGAGAAAGGAAGAAGTAATCTAGCGAGAGAAACAGCTGAAGCGACGAAGACAATTGCAAGGATGGAAACAAATAAAAGAGCAGAAACGTTGGAAAATGTAGCCGAGATAGATAATGGATACAGGACATACACAATGGAGGAAATTGAAAAGGCCACAAACATGTTCTCGGAATCTCAGAAAATAGGGGAAGGGGGGTATGGCCCTGTCTACAGGTGTTACCTTGATAACACTGAAGTGGCCGTGAAGGTTCTTCGCCCAGGTTCCGCACAGGGGAAGTCGCAGTTTCAGCAAGAGGTAAACATACTTGGGAGCATGAGGCATCCCAACATGGTGCTTCTTGTAGGAGCGTGTCCAGAGGAGGGAGTGCTGATATACGAATACATGGCGAACGGAAGTTTGGAGGAATGCCTATTTAGAGAGGAGGAAGAAGCCATGGGTTGGGAGCTCAGGTTTAAGATAGCGGCAGAGATAGCGGCGGGACTGCTGTTCCTGCACCAGACAAAGCCTGAACCGCTGGTGCACAGAGACCTGAAGCCAGCAAATATATTGCTGGACCACAATTACGTGAGCAAGATAAGCGATGTGGGACTCGCGAGGCTTGTGCCGGAAGCAGTGGCGGAGAATGTGACGCAGTGCCGCATGACTGCCGCAGCAGGAACCTTCTGCTACATCGACCCGGAATACCAGCAGACCGGAATGCTGGGGGTGAAGTCTGACGTGTATTCTCTGGGGATCATTCTTCTTCAGCTATTGACAGGCAGGCGGGCCATGGGCCTGGCCCACCTTGTGGATGAGTCCATTCAGCATGACTCCTTTTCTCAAATTCTGGACCCATCCGTCCCGGACTGGCCCCTCCCACAGGCCCTCTCCCTTGCCAACTTGGCTCTCCATTGCGCACAACTCCGGCGGAGGGACCGCCCTGACCTTGCCACCGTCCTCCTCCCTCACCTCCAGCTGTTGAGAGACTTTGCCCTACATCGCCATCATCATTCCTCCCAGGACCAGGACGTTCTCAGCGAACCCATGTCTCAACACTCTGGAACCCCATCAACCCCATCAACGCCAACCACAGACCAACCAAAACAAGACCCAGGCGCCGATGATGAGTAA 2271 0.4905 MRLASTKASIHKWGGGNGLVAVAVEKDDKRSRNAVKWAADTLLSRGQILVLIHVLYPTSSSLSRGSQAIVCNTNCPTASPQRDKLVNITKELFCTFHCYCTRKDIQCLDVVIEDMDIVRGITEYVSHAAIEHLVLGAASKHGFIRFKSSSTPNSILKGVPDFCSVYIISKGKISSVRNAARKASHASPLLRHIETQNDENGNESDVSSRRLSFKDTRVALRQSTWQGESMKKFGLSGRSGIDYAESDTDISFVSSGRPSSVRSTSVFYEYGDHGRNSRTSTSSDRSMGSTWMKLKHTDPNSPDLSFSEESSRSSFSSSLQNIDEVEADMRRLKLELKQTMEMYSAACKEALTAQQKLGEMHSWKMEEEKKLEEARLSHEAADAIAGKEKGRSNLARETAEATKTIARMETNKRAETLENVAEIDNGYRTYTMEEIEKATNMFSESQKIGEGGYGPVYRCYLDNTEVAVKVLRPGSAQGKSQFQQEVNILGSMRHPNMVLLVGACPEEGVLIYEYMANGSLEECLFREEEEAMGWELRFKIAAEIAAGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKISDVGLARLVPEAVAENVTQCRMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQLLTGRRAMGLAHLVDESIQHDSFSQILDPSVPDWPLPQALSLANLALHCAQLRRRDRPDLATVLLPHLQLLRDFALHRHHHSSQDQDVLSEPMSQHSGTPSTPSTPTTDQPKQDPGADDE 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02527 756 Coils Coil 391 411 - -
Spst4g02527 756 MobiDBLite consensus disorder prediction 270 319 - -
Spst4g02527 756 FunFam Os07g0541700 protein 515 604 - -
Spst4g02527 756 PANTHER OS02G0152300 PROTEIN 20 729 - -
Spst4g02527 756 MobiDBLite consensus disorder prediction 723 748 - -
Spst4g02527 756 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 28 168 - -
Spst4g02527 756 CDD STK_N 19 171 - -
Spst4g02527 756 Gene3D HUPs 19 168 IPR014729 -
Spst4g02527 756 SUPERFAMILY Protein kinase-like (PK-like) 423 700 IPR011009 -
Spst4g02527 756 MobiDBLite consensus disorder prediction 190 210 - -
Spst4g02527 756 Gene3D Phosphorylase Kinase; domain 1 401 514 - -
Spst4g02527 756 Gene3D Transferase(Phosphotransferase) domain 1 515 730 - -
Spst4g02527 756 Pfam Universal stress protein family 22 160 IPR006016 -
Spst4g02527 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Spst4g02527 756 MobiDBLite consensus disorder prediction 274 319 - -
Spst4g02527 756 SMART serkin_6 442 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02527 756 ProSiteProfiles Protein kinase domain profile. 442 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02527 756 MobiDBLite consensus disorder prediction 196 210 - -
Spst4g02527 756 MobiDBLite consensus disorder prediction 718 756 - -
Spst4g02527 756 Coils Coil 315 342 - -
Spst4g02527 756 Pfam Protein kinase domain 443 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02527 756 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 415 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02527 Spst-Chr4 65322586 65325953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02527 7 711 Receptor kinase-like Gene Family AT1G78940 52.797 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst4g02527 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02527 - - gmx:100818471 932.169