Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02526 ATGTTTTTGTTGTGTGTTCGCTCTCACAGGCACACTCTCTACTCTTTGAATTTGCCCTTCCTTTCTGTGGAAGAAGAGGAAGAGGTTCCGCTCTGTGGCGGTGGCTATCCCATTCCAGATGCCGATGCGGATCTATTCCCATTGAATACCAAATCTAATCGTAGCATAAGCATTTGGATGGGATCTAAATCCATCTTATTGCGGCTGCGGAGGGGAAGGAGAAAGAAGGCGTTGCAGTTTGATTCCCTTGGAAAACGTGGATCATTGTTTGGGTGTTTGAAAAGGCAATTCAAAATTCAGCGACCGGGTTCGGGGGCTGAATTGCCCCAAGGAGGTGGTGAGTTCAACCCTTATCCTGTAGTACGGAGGGTGAGTTCCACCCATTCTATAATGATGGACGATGATATGGAGGCCGGTACTTTGGGTGTGGGGGCTTACCAGGACAAGCCCAGAATCTTCCCCAACATGCGCACTAAACCTTACACCCCTCTGATATTTCGGATTCTGCTTGGTATAAATGTTCGTGTCTTGTTCATTCTTTTGCTCCTCGGACTGGGTGCTATCTTTTACGTGGGAGCCAGTACCTCTCCGATCATTGTGTTTGTCATCTCTGTTTGCATTTTCAGCTTCCTTGTTGCCATCTATCTTGTAAAGTGGGTGCTCGCAAAAGATGAAGGGCCTCCTGAAATGGTTCAGATTGATGATGATTCAAACTTGCCTAAGGTGGATCGGTCATGTGAGAAGAATACCAATAGACACTCTAGTGAGAAAAGAGGATCATATGAAGATAGTCTGATTATAATGGCTATTGGTGTAGCCTTTATAGCAGATGCTATACGAGATGGAGCTGAAGGATTTTTCAGGACCCAGTATGGGAGTATATCCAAGATGGCCATGTTCCTTGCTGTTGTCATTTTATGCATATATTTGTTTCGCAGTACAACTCCTCAACAAGAATCTTCTGGTCTTGGAAGGTCAACTTCTGCATACATTACTGTAGCTGCTTTCCTTTTAGGTGCCATTTGTTCGGGTATTGCTGGATATGTAGGCATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTTTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTTGCCACTCGTGCAGGTGGTTTATCTGCGATCATTGTTGTTGGAATGGCTGTAATTGGTATAGCGGTGCTTTATGCCACGTTTTATGTTTGGTTGGGAGTGGACTCACCTGGTTCAATGAAGGTTACTGATTTACCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCGTTTGTTGCTCTATTTGCTCAGTTGGGTGGTGGAATATACACAAAAGCAGCTGATGTTGGAGCAGATCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGGGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCTATGATACTTGGTGGAACAATGGCACAACGTTGTAAAATTGCAGATCCATCGGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATTTGGTAGTTTCATCAATTGGAATATTTTCTATTCGGGGTACACGCGAAACTGGAGTAATGGTTCCTGTGGAGGATCCTATGACAATTCTTCAAAAAGGATATTCTTATACGATAGTTTTAGCTGTTCTGGCATTTGGTTTGTCTACCCGGTGGTTACTTTACACTGAGCAAGCACCTTCTGCATGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATCATCACTGCGTACATATTTGTCTGGATTGCCAAGTATTATACTGACTACAAGCATGAGCCGGTGCGCATATTAGCCCTTTCCAGCTCCACTGGACATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTAATCAGTGTGTCAATTGTCTCAGCTTTCTGGCTGGGCCACACCTCTGGACTAGTAGATGAAGCAGGAAATCCAACTGGTGGGTTGTTTGGCACAGCTGTAGCGACAATGGGAATGCTAAGCACTGCTGCCTATATTCTTACTATGGATATGTTTGGCCCAATAGCTGATAATGCTGGAGGAATTGTGGAGATGAGTCAGCAGCCTGAAAGTGTCCGGGAGATAACAGATGTCCTTGATGCAGTAGGAAACACGACCAAAGCTACCACCAAAGGATTTGCTATTGGTTCTGCCGCTCTTGCATCTTTCCTTTTGTTTAGTGCGTATATGGACGAGGTTTCTGCTTTAGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAGGTTTTTGTTGGTGGTTTGCTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCTTGTTCTGCTGTTGGCAGAACTGCACAAGAGGTTGTTAATGAAGTGCGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAAAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCGTTTCCCCTATTGTAGTTGGGTTTATCTTCCGAATTTTGGGCTACTATACAGGGCAACCTTTACTCGGGGCTAAAGTTGTGGCTGCATTGCTCATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAATACATTGAGACTGGAGCTCTTGGAGGGAAGGGAAGTGAAGCTCACAAAGCAGCCGTAACTGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGTCCTTCAATCCATGTTCTTATAAAGATGCTCGCAACCATTACACTGTTGACAAGACAAGAATGGACAAAAGCTAAGCTCACATATATGTCTACGCGCGCTGTGTGTATTTGGACTTCAAATGCAAATGCAATGTCTCTCAGAAGCAGCGGTTTGTTTTGGTTTCAAATAAATTGCTCCGATTCAAAGCAAGGTAGCCGTGGCTTTGGAGAAAACTCTAACAGGATTAAGACCAACAAATCTGACAAGGGTTTCGTCTCGCAGCAAAGTGGCAAGGGATCAACACCTAAACAGTCTCGCCCTTTATCTTCTCAGGCACCCCGGTTAAATTCACAACCTGACGGAAAATCTAGGAACGATTTTTTGGATGTTGACTTTGAAGAACGCCTAAAAACAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGCAAAAAGAATTTGGACCAATTGACTATGATGCTCCAATTTCTTCCGACGATAAGACAATTGGCCTTCCTACTAAGATTGGAGTAGGGGTAGCTGTTGCAGTCTTCGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCAGGAAGTGTTAGTCCCACTGATGACAATGCTGTGGTCAATAGTAAGTTGTCCGAGGAGGATAAAGCTACTCTCCAGAGTAGGCTGAAGGAATTCGAAGCAACATTAAGTATTTCCCCAAGAGATCCAACTGCTCTTGAAGGAGCTGCAGTAACTTTGGCTGAGCTAGGAGAATATGCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGAAAAACCTAATGATGCTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTACGAACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGCTCCGCAAGTGTTTCCAAAGATATCCAATTTGAAGTTCTCCGTGGACTTACCAATTCATTACTTGCTGCCAAAAAGCCAGAAGAGGCTGTTCAATTTCTTTTGGCCTTTCGTGAGGATCTGAGTTCAGAAAACTTAAGCAAAAAGTCTAATAGCAACCCATCAGACTCACAGAAGCTGGATCCTGTTCAAGTTGAATTACTTCTAGGGAAAGCATACTTAGATTGGGGCCATGTTAGTGATGCTGTAGCTGTTTGTGATCAACTCATATCTGCTTACCCTAATGATTTTCGTGGGTACTTAGCTAAGGGAATCATCCTAAAAGAAAGCAAAAATATTGGTGATGCAGAAAGAATGTTCATACAAGCTAGGTTCTTTGCACCTGATAAAGCCAAAGCACTTGTGGACCGTTATGCAAGATGA 4155 0.4373 MFLLCVRSHRHTLYSLNLPFLSVEEEEEVPLCGGGYPIPDADADLFPLNTKSNRSISIWMGSKSILLRLRRGRRKKALQFDSLGKRGSLFGCLKRQFKIQRPGSGAELPQGGGEFNPYPVVRRVSSTHSIMMDDDMEAGTLGVGAYQDKPRIFPNMRTKPYTPLIFRILLGINVRVLFILLLLGLGAIFYVGASTSPIIVFVISVCIFSFLVAIYLVKWVLAKDEGPPEMVQIDDDSNLPKVDRSCEKNTNRHSSEKRGSYEDSLIIMAIGVAFIADAIRDGAEGFFRTQYGSISKMAMFLAVVILCIYLFRSTTPQQESSGLGRSTSAYITVAAFLLGAICSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIADPSGFILFPLVVHSFDLVVSSIGIFSIRGTRETGVMVPVEDPMTILQKGYSYTIVLAVLAFGLSTRWLLYTEQAPSAWFNFALCGLIGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSALAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIVSPIVVGFIFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLLTRQEWTKAKLTYMSTRAVCIWTSNANAMSLRSSGLFWFQINCSDSKQGSRGFGENSNRIKTNKSDKGFVSQQSGKGSTPKQSRPLSSQAPRLNSQPDGKSRNDFLDVDFEERLKTVRRSALEQKKAEEQKEFGPIDYDAPISSDDKTIGLPTKIGVGVAVAVFGLVFAFGDFLPSGSVSPTDDNAVVNSKLSEEDKATLQSRLKEFEATLSISPRDPTALEGAAVTLAELGEYARAASLLDDLTKEKPNDADVFRLLGEVKYELKDYEGSVAAYKSSASVSKDIQFEVLRGLTNSLLAAKKPEEAVQFLLAFREDLSSENLSKKSNSNPSDSQKLDPVQVELLLGKAYLDWGHVSDAVAVCDQLISAYPNDFRGYLAKGIILKESKNIGDAERMFIQARFFAPDKAKALVDRYAR 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02526 1384 SMART tpr_5 1307 1340 IPR019734 GO:0005515
Spst4g02526 1384 SMART tpr_5 1220 1253 IPR019734 GO:0005515
Spst4g02526 1384 SMART tpr_5 1186 1219 IPR019734 GO:0005515
Spst4g02526 1384 SMART tpr_5 1341 1374 IPR019734 GO:0005515
Spst4g02526 1384 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 196 975 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Spst4g02526 1384 Gene3D Tetratricopeptide repeat domain 1148 1383 IPR011990 GO:0005515
Spst4g02526 1384 Pfam Inorganic H+ pyrophosphatase 208 969 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Spst4g02526 1384 SUPERFAMILY TPR-like 1169 1376 IPR011990 GO:0005515
Spst4g02526 1384 MobiDBLite consensus disorder prediction 1015 1069 - -
Spst4g02526 1384 MobiDBLite consensus disorder prediction 236 256 - -
Spst4g02526 1384 Pfam Tetratricopeptide repeat 1173 1227 - -
Spst4g02526 1384 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 201 969 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Spst4g02526 1384 NCBIfam V-type H(+)-translocating pyrophosphatase 201 969 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Spst4g02526 1384 MobiDBLite consensus disorder prediction 232 256 - -
Spst4g02526 1384 MobiDBLite consensus disorder prediction 1015 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02526 Spst-Chr4 65302364 65320220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02526 130 969 Primary Pumps ATPases AT1G16780 82.143 0.0 1400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02526 4 65302364 65320220 Spst4g02526 4 65302364 65320220 ECH