Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02524 ATGAAGATGAAAGTGAGTAGAAGCATTTCGATATCCACCTCAAGAATCATTAAAAGGATCCCAAACCATCTGAAGCTGGCATCCAGATCCTTAAGTTGCCGTCATCAACACCATTCAAGGAAGCCATTGCTGGCGTCAGGAGAATCCTCCGACGGCACAAGGAGTGGCAAGGTTCCCAAAGGATTCCTCGCTGTTTATGTGGGTCCCCACTTTCGGAGATTTGTCATTCCGGTTAGCTTCTTGGCCATGCCTGACTTCGGTGTTTTGATGGACTCCGTCGCCGACGAATACGGCTGCGACCATGACGGTGCCATTCACATCCCCTGCGATGAAGACCATTTTCAGCAAATTTTGACCTCCTGTTCCCAACGAAAACGGGCCTTGCCTTCTAAGAAACCTGCTAACATCCCCCTCATTTGTAGTCATTAA 429 0.4872 MKMKVSRSISISTSRIIKRIPNHLKLASRSLSCRHQHHSRKPLLASGESSDGTRSGKVPKGFLAVYVGPHFRRFVIPVSFLAMPDFGVLMDSVADEYGCDHDGAIHIPCDEDHFQQILTSCSQRKRALPSKKPANIPLICSH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02524 142 Pfam Auxin responsive protein 40 119 IPR003676 GO:0009733
Spst4g02524 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 117 IPR003676 GO:0009733
Spst4g02524 142 MobiDBLite consensus disorder prediction 31 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02524 Spst-Chr4 65299462 65299890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02524 58 118 Calmodulin-binding Proteins AT3G43120 54.098 3.53e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02524 K14488 - vun:114165672 200.675