Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02502 ATGGAGAGAGAAAAGCCCAGCGACCAACATCGCACCCTCGTTTCACGCGCACTTCTTCCATCAGTGGGAAAGCATTGGATAAGAGAGATGATCATCAACGTGAAGGAATCCACGATGGTGCGGCCGGCGGAGGAGGTGGAGCGGCGGGTGGTGTGGAACTCCAACGTGGACCTGGTGGTGCCGAATTTCCACACGCCCAGCGTCTACTTCTACAGACCGAACGGCGCGCCCAACTTTTTCGAGGGGAAGGTTCTGAAGGAGGCATTGAGCAAGGTACTGGTGCCGTTCTACCCAATGGCTGGGAGGCTTCGGCGAGACGAAGACGGCCGCGTGGAGATTGACTGCGATGGTCAAGGGGTGCTCTTCGTTGAGGCGGAGACCTGTTCCGTCATCGACGATTTCGGGGACTTTGCACCTACCCTCGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCACAAGGGATCGAAACCTATCCCCTCTTGGTATTACAGGTTACACGTTTCAAATGTGGAGGGGCATCACTTGGAGTTGGTATGCAACATCATGCAGCAGATGGGGCCTCAGGGCTACACTTCATCAATACATGGTCCGATGTGGCTCGTGGCTTGGATGTTTCTATTCCACCCTTCATTGATAGGACAATACTTCGTGCCAGAGATCCACCTCGACCTGCTTTTGATCACATCGAATACAAGCCCCCACCAGCCATGAAGACTCAACAACCCACTAAACCGGGCACAGACTCAGATAGTGCAGCTGCTGCTGTATCTATTTTCAAACTGACACGTGACCAGCTCAACACCCTCAAAGCCAAGTCCAAAGAAGATGGGAACACAATCAACTACAGCTCTTATGAGATGTTGGCAGGTCACGTGTGGAGAAGTGTATGCAAAGCAAGAGCACTTCCTGATGATCAAGAGACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGCTGCAACCTTCTCCCCCACCAGGTTACTTTGGCAATGTGATCTTCACAACCACACCTATAGCCGTGGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCCGAATCCACGATGCATTGCTACGAATGGACAATGAATATTTGAGATCCGCTCTTGACTATCTAGAGCTGCAACCTGATCTGAAAGCTCTGGTTCGAGGGGCACACACTTTCAAATGCCCAAATCTTGGCATCACTAGCTGGACCAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGACCTGGTGGGGTTGCATACGAGGGGCTATCTTTCATAATTCCAAACGCAACCAATGACGGGAGCTTATCTGTGGCAATAGCTCTGCAGCCCGAGCATATGAAGGTGTTTAAGGAATACTTGTATGATATTTGA 1398 0.5114 MEREKPSDQHRTLVSRALLPSVGKHWIREMIINVKESTMVRPAEEVERRVVWNSNVDLVVPNFHTPSVYFYRPNGAPNFFEGKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEAETCSVIDDFGDFAPTLELRQLIPAVDYSQGIETYPLLVLQVTRFKCGGASLGVGMQHHAADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPAFDHIEYKPPPAMKTQQPTKPGTDSDSAAAAVSIFKLTRDQLNTLKAKSKEDGNTINYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPSPPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGVAYEGLSFIIPNATNDGSLSVAIALQPEHMKVFKEYLYDI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02502 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 37 463 - -
Spst4g02502 465 FunFam Spermidine hydroxycinnamoyl transferase 30 232 - -
Spst4g02502 465 Gene3D - 247 465 IPR023213 -
Spst4g02502 465 FunFam Tryptamine hydroxycinnamoyl transferase 241 463 - -
Spst4g02502 465 Gene3D - 26 234 IPR023213 -
Spst4g02502 465 Pfam Transferase family 32 462 - -
Spst4g02502 465 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02502 Spst-Chr4 65157921 65161937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02502 30 465 Monolignol Biosynthesis Gene Families AT5G48930 77.346 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02502 K13065 - gmx:100820075 837.41