Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02482 ATGGATTCGCAAAACGAAAATGCTCAAGGTAACCCCAGAAACATAATCTTCGACAAATACGAGATGGGGCGGGTGCTCGGGCAGGGAAACTTTGCCAAGGTCTACCATGGCAGAAACCTCGCCACCAACGAGAACGTCGCGATCAAAGTCATAAAGAAAGAGAAGCTGAAAAAAGAGCGACTCGTGAAGCAGATCAAGCGCGAGGTTTCGGTGATGAAACTGGTGCGGCATCCCCACATCGTTGAACTCAAGGAAGTGATGGCCACCAAGGGAAAAATCTTCCTCGTCATGGAATACGTCAGGGGCGGCGAACTCTTCACCAAAGTCAACAAAGGTAAACTCTCCGAAGACCTCGCCAGAAAATACTTCCAACAACTCATCAGCGCCGTCGACTACTGCCACAGCCGCGGCGTCACCCACCGCGACCTCAAGCCGGAGAATCTCCTTTTGGACCAGAACGAGGACCTCAAAGTCTCCGACTTCGGACTCTCCGCGCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCGTAACCCCGTGTGGGACCCCTGCTTACGTGGCACCCGAAGTTCTGAAGAAAAAAGGTTACGACGGGTCAAAGGCTGATATCTGGTCCTGTGGGGTAATTCTCTACGCTTTGCTCTGTGGCTATTTACCCTTCCAAGGTGAGAACGTTATGAGAATTTATCGAAAAGCGTTTAGAGCTCAATATGAATTACCCGAATGGATTTCGCCGGAGGCCGAAAATCTCATTTCGAATCTCCTTGTTGCCGATCCTGCAAAGAGGTATTCCATTCCCGATATAATGAAGGACCCCTGGTTTCAATTTGGGTTCATGAGGCCCATTGCGTTTTCAATTAAGGAGTCCGAGGTAGAAGGAAACATTGATTTCGACGATGTCGGGAACAACGAGGATGTGGTTGCAATGAGGAAACCCGCGAGGCCGTTTTACAATGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTCAGGAGCTTGTTTGAGACGAGGAAGCGGTCGCCGTCGATGTTTATTTGTAAATTTTCGGCTTCGGCGGTGATGGCGAAGGTGGAGGCTACGGCGAAGAAGCTGAATTTTCGAGTTACGGGGAAGAAGGAGTTTGCGGTGAGGATGCAGGGGGAGGAGGAGGGGAGGAAGGGGAAGTTGGCGATGACGGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCGGTGGTTGAGTTTTCCAAATCTGCCGGAGACACGTTGGAGTATGTTAAATTCTGCGAGGAGCAAGTGAGACCATCACTCCAAGACATTGTCTGGAGCTGGCAGGGTGATAGTAATAACTCCTCCAGCAATTAG 1347 0.5145 MDSQNENAQGNPRNIIFDKYEMGRVLGQGNFAKVYHGRNLATNENVAIKVIKKEKLKKERLVKQIKREVSVMKLVRHPHIVELKEVMATKGKIFLVMEYVRGGELFTKVNKGKLSEDLARKYFQQLISAVDYCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYRKAFRAQYELPEWISPEAENLISNLLVADPAKRYSIPDIMKDPWFQFGFMRPIAFSIKESEVEGNIDFDDVGNNEDVVAMRKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAVMAKVEATAKKLNFRVTGKKEFAVRMQGEEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEQVRPSLQDIVWSWQGDSNNSSSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02482 448 Gene3D Kinase associated domain 1, KA1 317 437 - -
Spst4g02482 448 Coils Coil 48 68 - -
Spst4g02482 448 FunFam Non-specific serine/threonine protein kinase 13 311 - -
Spst4g02482 448 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02482 448 Pfam NAF domain 316 371 IPR004041 GO:0007165
Spst4g02482 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 431 - -
Spst4g02482 448 Gene3D Transferase(Phosphotransferase) domain 1 12 316 - -
Spst4g02482 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Spst4g02482 448 CDD CIPK_C 318 432 - -
Spst4g02482 448 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Spst4g02482 448 FunFam Non-specific serine/threonine protein kinase 313 436 - -
Spst4g02482 448 FunFam Non-specific serine/threonine protein kinase 12 99 - -
Spst4g02482 448 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02482 448 ProSiteProfiles NAF domain profile. 312 337 IPR018451 GO:0007165
Spst4g02482 448 SUPERFAMILY Protein kinase-like (PK-like) 16 312 IPR011009 -
Spst4g02482 448 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02482 Spst-Chr4 65057507 65058853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02482 13 447 CBL-interacting serine-threonine protein kinases AT5G10930 63.242 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst4g02482 Pkinase 2.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02482 - - vun:114167214 784.637