Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02480 ATGCCAACTGACACGTCACCACTTTCCGGCGAAACTGTCTGTGTTACCGGCGCCGGCGGGTTCATAGCCTCTTGGCTTGTGAAACTTCTCTTAGAGAAAGGTTACACTGTAAGAGGAACAGTGCGAAACCCAGAGGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGAGCGAGGGAGAGACTAACTCTGCATAAAGTTGATCTCTTCGACATTAACTCCATTAAAGCTGCTTTTCAAGGTTGCCACGGTGTCTTCCACACTGCTTCTCCGATCACCGATAACCCCGAAGAGATGGTGGAGCCAGCAGTGAATGGAACGAGGAATGTGATAATAGGAGCTGCAGAAGCAAAAGTGCGACGGGTGGTGTTCACTTCGTCAATTGGCACGGTGTATATGGACTCCAACACGAGTAGGGATGTGTTGGTTGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGACGGTGGCAGAACAAACAGCATGGGATGTAGCAAAAGAGAGAGGGGTGGAGTTGGTTGTGGTGAACCCAGTTTTGGTTATTGGGCCATTGCTTCAACCTACCATTAATGCTAGTACAATTCACATTCTGAAGTACCTTACTGGCTCTGCTAAGACTTATGTAAATGCCACACAGGCTTACGTACATGTCAAGGATGTGGCATTAGCCCACGTTCTTGTGTATGAGACTCCTTCAGCTTCTGGTCGATACATATGTGCTGAAAGTTCTCTGCATCGTGGTGATCTGGTTGAAATTTTGGCTAAGTTTTTCCCAGAGTACCCTATTCCCACCAAATGTTCAGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAAATTTGGGAATGGAATTCACCCCAGTGAAGCAGTGTCTGTATGAGACAGTTAAAAATCTGCAGGACAACGGCCACCTTCCTGTGCCTCCAAAGCAAGAAGACTAA 993 0.4582 MPTDTSPLSGETVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPEDPKNGHLKELEGARERLTLHKVDLFDINSIKAAFQGCHGVFHTASPITDNPEEMVEPAVNGTRNVIIGAAEAKVRRVVFTSSIGTVYMDSNTSRDVLVDESFWSDLEYCKNTKNWYCYGKTVAEQTAWDVAKERGVELVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVHVKDVALAHVLVYETPSASGRYICAESSLHRGDLVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKNLGMEFTPVKQCLYETVKNLQDNGHLPVPPKQED 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02480 330 Gene3D - 11 330 - -
Spst4g02480 330 CDD FR_SDR_e 13 299 - -
Spst4g02480 330 FunFam Cinnamoyl-CoA reductase 1 4 330 - -
Spst4g02480 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 313 - -
Spst4g02480 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Spst4g02480 330 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02480 Spst-Chr4 65025734 65028001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02480 8 276 Monolignol Biosynthesis Gene Families AT1G80820 71.747 7.15e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02480 K09753 - gmx:100811528 623.239