Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02460 ATGGCAGCAAACACGGTGTGCGTAACTGGTGCTGGAGGATTCGTAGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGTTTCTTTGTCCATGGAACTGTCAGACAACCTGGTAGCGAGAAATACCAACACTTGCTGAAACTGGAGGGAGCTTCTGAAAACCTCACACTCTTCAAAGCAGATCTCTTGGATTACGATTCTGTTCTTTCGGCATTTGTTGGATGCACTGCAGTTTTCCATGTTGCTTGCCCTGTCTTTGTTGACTTCCGCTATAAGGATTTAGGAGTAGAAATGATTGAACCTGCTGTGAAAGGAACCGCTAATGTACTTGAAGCTTGTCTAGAAGCTAAAGTGCAACGGGTTGTCTTTGTATCATCGTTAGCTGCTATTTGCATGGACCCGAATTTACCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAGAAGAACTGAGAACTGGTACTGTTATTCCAAGACAGAGGCAGAGAAGCAGGCACTGGACTTTGCAAAAAGAACTGGGCTTGATGTGGTAAGCATTTGCCCTTCCCTTGTGTTAGGGCCAATTTTACAGTCAGCCACTGTCAATGCAAGTAGCTTGGTTGTTCTCAAACTTTTGAAAGGTGCCTACTATTTCCTTAACAAATTATTAACTAATTCTGAGTTTGGCCTTAGAAATTTGGTTGACCCAGGCGTCATGTCTAATCAACACAATTATGCCCTTCATGGGAGTTCTGCACTGTGTGGTGACTCATTTGAAAATAAGACCCGTTGGATAGTCGATGTACGGGATCTAGTTGATGCAATCTTTTTGGTGTATGAAAAGCACGAGGCAGAACGGAGATACTTGTGCAATTCACATACCGTCAACACACGGGATTTAGTGGAGAAACTAAAGAGCATATATCCCAGCTACAAGTACCCTTCAAACTTTACAGAGGTGGATAATTACTTAAGGTTGTGCTCAGAGAAACTGGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGGGAGCTATGGCTTCCTGCAATCACAATAA 1074 0.4292 MAANTVCVTGAGGFVASWLVKLLLSKGFFVHGTVRQPGSEKYQHLLKLEGASENLTLFKADLLDYDSVLSAFVGCTAVFHVACPVFVDFRYKDLGVEMIEPAVKGTANVLEACLEAKVQRVVFVSSLAAICMDPNLPKDKVIDESYWSDKDYCRRTENWYCYSKTEAEKQALDFAKRTGLDVVSICPSLVLGPILQSATVNASSLVVLKLLKGAYYFLNKLLTNSEFGLRNLVDPGVMSNQHNYALHGSSALCGDSFENKTRWIVDVRDLVDAIFLVYEKHEAERRYLCNSHTVNTRDLVEKLKSIYPSYKYPSNFTEVDNYLRLCSEKLERLGWKYRSLEETLIDSVGSYGFLQSQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02460 357 CDD FR_SDR_e 6 335 - -
Spst4g02460 357 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 347 - -
Spst4g02460 357 Pfam NAD dependent epimerase/dehydratase family 6 284 IPR001509 -
Spst4g02460 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 351 IPR036291 -
Spst4g02460 357 Gene3D - 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02460 Spst-Chr4 64911408 64915296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02460 6 351 Monolignol Biosynthesis Gene Families AT2G33590 54.335 2.95e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02460 - - gmx:100784817 469.544