Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02431 ATGGCAACGGCGACGTATCCTCCGCCGCCACCTTTTTACAGGCTTTACAAAGATTACTTGCAAGATCCTAAGTCTGCTCCCGAGCCTCCGCCGCCTATTGAAGGGACTTACGTTTGTTTCGGAAGCAATTACACGACTAGTGATGTTCTACCAACCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAAAGGGCCTAATGTTGATTTCAAGAAGGAGTTGAGGTCACTTAATGGAGAGTTGCAACTACATGTCTTGGAGCTTGCTGATATTCTTATCGAGAGACCTTCACAGTATGCAAGGAGAGTTGAAGAAATTTCTACAGTATTCAAAAATTTACATCACCTTTTAAATTCATTGCGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAACGCCGGAAACAGGCAGTGGAGGACATAAAGAGGAGTAGAGAAGAAGCACGACGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGCCATTAG 507 0.4517 MATATYPPPPPFYRLYKDYLQDPKSAPEPPPPIEGTYVCFGSNYTTSDVLPTLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRSREEARRLLNESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02431 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Spst4g02431 168 Gene3D - 60 159 IPR044888 -
Spst4g02431 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
Spst4g02431 168 Coils Coil 133 160 - -
Spst4g02431 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Spst4g02431 Med7 1.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02431 K15148 - gmx:100792250 313.538