Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02427 ATGGACATTCATTTAGAGAGGGGAGAAGGTGGGTGGGGCTCATTGGTGGAAAGGTTATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCAACCGGTATGACAATAATTCATGAATCTTGTGAACTCGCAAGGCGAGGGAAAGAACAACCCACATGGCGAGTGTTTTCTTTGAAGGAATTACACTCTGCTACGAATAATTTTAACTATGACAACAAGCTTGGAGAAGGAAGCTTTGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCGCAAATTGCTGTGAAAAGATTGAAAGTGTGGAGCAACAGAGCTGAGACGGAATTTACAGTTGAACTTGAAATCTTGGCAAGAATACGACACAAGAATCTTCTAAGTCTTCGTGGATATTGTGCTGAAGGACAGGAACGGTTGATTGTTTATGAATATATGCAAAATCTGAGCCTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCCCCTCGATTGGAATCGGCGCATGAATATCGCAATTGGTTCTGCTGAAGGAATTGTATACCTTCACCACCAAGCAACACCACATATCATCCACAGGGACATTAAAGCAAGCAATGTGTTGCTGGATTCTGATTTCCAGGCCAGAGTTGCTGATTTCGGGTTTGCTATGTTGATCCCTGATGGGACAACACATGTGCCTACAAAAGGTAAGGGTACCCTTGGCTACCTTGCACCAGAATATGCTATGATGGGTAAACCAAATGAGAGTTGTGATGTCTACAGTTTCGGTGTTCTCCTTCTAGAACTCGCCAGTGGCAGAAGACCGACTGAAAAACTTAGTTCCACAGTGACACAATCCATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGTATTTATGTGGAGGGAGAGCTTAAAAGAGTTGTTTTAGTTGCACTTATGTGTGTTCAGGATCTACCTGAGAAGAGACCAACCATGCTTGATGTGGTAGAGCTACTCAAGGGAGAGTCTAAGGATAAATTTTCTCATATAGAGAACAGTGAAATGTTCAGAAGCCCTCTAACTGAAGAAATCAATAATGGAACATCAGTGGTTGAAGACAGGTTAGACTATATCTCTGAAGAAAAAGAACTAGAACGTCCGTTGAAAGAGAATGCTGAACTATGA 1182 0.423 MDIHLERGEGGWGSLVERLWLFGFVAEKFPTGMTIIHESCELARRGKEQPTWRVFSLKELHSATNNFNYDNKLGEGSFGSVYWGQLWDGSQIAVKRLKVWSNRAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECPLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAMLIPDGTTHVPTKGKGTLGYLAPEYAMMGKPNESCDVYSFGVLLLELASGRRPTEKLSSTVTQSIVDWALPLVCEKKFSEIADPRLNGIYVEGELKRVVLVALMCVQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRSPLTEEINNGTSVVEDRLDYISEEKELERPLKENAEL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02427 393 FunFam PTI1-like tyrosine-protein kinase At3g15890 39 142 - -
Spst4g02427 393 FunFam PTI1-like tyrosine-protein kinase At3g15890 143 354 - -
Spst4g02427 393 Gene3D Transferase(Phosphotransferase) domain 1 143 356 - -
Spst4g02427 393 SMART serkin_6 67 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02427 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Spst4g02427 393 SUPERFAMILY Protein kinase-like (PK-like) 49 338 IPR011009 -
Spst4g02427 393 Gene3D Phosphorylase Kinase; domain 1 33 142 - -
Spst4g02427 393 PANTHER OS01G0253100 PROTEIN 48 344 - -
Spst4g02427 393 Pfam Protein tyrosine and serine/threonine kinase 69 336 IPR001245 GO:0004672|GO:0006468
Spst4g02427 393 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02427 393 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02427 Spst-Chr4 64690299 64693536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02427 54 334 Trihelix Transcription Factor Family AT1G68690 48.421 3.37e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Spst4g02427 PK_Tyr_Ser-Thr 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02427 - - gmx:100814204 630.172