Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02371 ATGAGTGTGGTGGGTTTGGATTTCGGTAATGAGAGTTGCAAGGTTGCAGTTGCGAGGCAAAGAGCGATTGATGTTGTGCTTAATGACGAGTCCAAACGTGAAACGCCTGCCATTGTGTGCTTTGGTGATAAGCAACGTTTCATTGGCGCTGCTGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATATCACAGTTTAAGAGACTCATTGGTAGAAAGTTCTCTGATCCCGAATTGCAACGGGATCTTAAGTCAGTGTCGTTTATTGTTACCGAGGGGAATGATGGGTACCCGTTAATTCACGTCCAATACTTGGGTGAGGCTAAGAAATTTACACCTACACAAGTGTTTGGCATGATGTTGTCGAATCTAAAAGAAATTGCAGAGAAGAATCTCAATACGGCTGTTGTTGATTGTTGCATTGGAATTCCAGTTTATTTTACTGATTTGCAGAGGAGGGCCGTGTTGGATGCGGCCACGATTGTTGGTCTACACCCGCTTCAGTTGATTCATGAAATGACTGCCACTGCCTTGGCCTTTGGGATTTATAAAACGGACCTTCCAGAAAATGATCAACTGAATGTTGCTTTTGTTGATGTTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAATTGAAAGTGTTGGCTCATTCTTATGATAGGTCTTTAGGTGGTAAGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTACTAAGTTCAAGGAAGAGTATAAGATTGATGTTTTCCAGAATGCCAGGGCTTGCATAAGGTTGAGGGCTGCCTGTGAGAAAATGAAGAAGATGCTTAGTGCAAATGCTGAGGCACCTCTCAACATTGAGTGTTTGATGGACGAGAAGGATGTTCGGGGCTTCATGAAGAGAGATGAGTTTGAGCTACTAAGTTTTCCAATTTTGGAACGTGTGAAGGGACCTTTAGAAAAGGCAGTTGCTGAAGCAGGTCTTACCATTGAAAATGTACATGTGGTTGAGTTGGTTGGTTCAGGTTCTCGTGTCCCAGCCATAAACAAAATATTGGCAGAGTTTTTCAAGAAAGAGCCAAGGCGAACAATGAATGCCAGTGAGTGTGTTGCAAAAGGTTGTGCGTTGAAATGCGCAATTCTTAGTCCAACTTTTAAAGTACGAGAATTTGAGGTCAATGAAAGCCTTCCTTTCTCGATTTCCCTTACATGGAAAGGTACTGGTCCAGATGCACAGGACAATGCACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCAAGTACCAAAGCACTAACATTCTATAGGTCAGGGACATTTTCTATTGATGTACATTATGGTGATGTAAGTGAGCTGCAAACACCTGCCAGGATTAGCACATACACTATTGGTCCATTCCAAACTGCAAATAGTGAAAGAGAAAAAGTGAAAGTAAAAGTTCGTTTGAATATCCATGGAATTGTATCTCTCGAGTCTGCAATGCTCCTGGAAGAAGCAGAAGTTGAGGTTCCGATTACCAAAGAAGCAACAGGAGAAAATACTAAGCTGAACATTAACAAAGCCCCAATTGAAGCGGCTACACCTCCAGCCTCCAATGACACTAGTGCAAATGTGCAAGATGCAAAGGTTAGTACTGATGCTTCCGGGGCTGAAGAGGGTGTTCCTGAGAACGAAGATAAGCCTTTGCAAACAAATACTGATACCAAAGCTCAGGCTCCAAAGAAAAAAGTTAAGAAAACTAGCATTGCTGTAACAGAGTTAGTTTATGGAGCAATGGTCTCTTCGGATGTCCAAAAAGCAATAGAGAAGGAGTTTGAAATGACTTTGCAAGATCGTGTGATGGAGGAAACCAAGGACAAAAAAAATGCGGTTGAGGCTTATGTTTATGAGATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGAAGATTTTACTGCCAAACTCCAGGAAGTGGAGGATTGGCTTTATGATGAGGGTGAAGATGAAGCTAAAGGTGTATATATTGCTAAGCTTGAAGAACTAAAAAAGCAAGGTGATCCAATTGAAGGACGTTACAAAGAATACATGGAGAGGGGTACTATAATTGAACAATTCGTATATTGTATAAATAGTTATAGAGAAGCCGCAAAATTGAATGATCCCAAATTTGATCACATTGACATTAATGAGAAACAGAAGGTTATAAATGAATGTGTTGAAGCTGAGAAATGGTTTAGGGAGAAGCAACATCAACAAAATTCACTTCCAAAATATGTCAACCCGATACTTTTGTCAACCGATATAAGAAGGAAAGCCGAGATTATTGATAGGTTCTGCAAGCCAATTATGACAAAACCAAGGCCAACCAAGCCAACTACACCTGGATCGGGAGCCTCATCTTCACAGGGTGAAGTGCAGCAACACCCCCGAGGAGATGTTAATGCCAACAATAACGAAAATACTGGGGATAGAAGAAGCCAAGCTGCACCAGCGTCTACTGAACCAATGCAGACTGATAAATCTGAGAACGCAGGCTCTGCTTAA 2556 0.4182 MSVVGLDFGNESCKVAVARQRAIDVVLNDESKRETPAIVCFGDKQRFIGAAGAASTMMNPKNSISQFKRLIGRKFSDPELQRDLKSVSFIVTEGNDGYPLIHVQYLGEAKKFTPTQVFGMMLSNLKEIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIVGLHPLQLIHEMTATALAFGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGKDFDEVLFHHFATKFKEEYKIDVFQNARACIRLRAACEKMKKMLSANAEAPLNIECLMDEKDVRGFMKRDEFELLSFPILERVKGPLEKAVAEAGLTIENVHVVELVGSGSRVPAINKILAEFFKKEPRRTMNASECVAKGCALKCAILSPTFKVREFEVNESLPFSISLTWKGTGPDAQDNAPENQQSSLVFPKGNPIPSTKALTFYRSGTFSIDVHYGDVSELQTPARISTYTIGPFQTANSEREKVKVKVRLNIHGIVSLESAMLLEEAEVEVPITKEATGENTKLNINKAPIEAATPPASNDTSANVQDAKVSTDASGAEEGVPENEDKPLQTNTDTKAQAPKKKVKKTSIAVTELVYGAMVSSDVQKAIEKEFEMTLQDRVMEETKDKKNAVEAYVYEMRNKLNDKYQEFVTASEREDFTAKLQEVEDWLYDEGEDEAKGVYIAKLEELKKQGDPIEGRYKEYMERGTIIEQFVYCINSYREAAKLNDPKFDHIDINEKQKVINECVEAEKWFREKQHQQNSLPKYVNPILLSTDIRRKAEIIDRFCKPIMTKPRPTKPTTPGSGASSSQGEVQQHPRGDVNANNNENTGDRRSQAAPASTEPMQTDKSENAGSA 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02371 851 MobiDBLite consensus disorder prediction 532 548 - -
Spst4g02371 851 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Spst4g02371 851 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Spst4g02371 851 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 551 IPR029047 -
Spst4g02371 851 MobiDBLite consensus disorder prediction 783 851 - -
Spst4g02371 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 715 793 IPR029048 -
Spst4g02371 851 Gene3D - 186 360 - -
Spst4g02371 851 CDD HSPA4_like_NDB 2 381 - -
Spst4g02371 851 Gene3D Actin; Chain A, domain 4 230 313 - -
Spst4g02371 851 MobiDBLite consensus disorder prediction 529 577 - -
Spst4g02371 851 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Spst4g02371 851 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Spst4g02371 851 MobiDBLite consensus disorder prediction 793 851 - -
Spst4g02371 851 FunFam Heat shock 70 kDa protein 4 107 207 - -
Spst4g02371 851 Gene3D - 597 706 IPR029048 -
Spst4g02371 851 FunFam Heat shock 70 kDa protein 4 596 706 - -
Spst4g02371 851 Gene3D - 38 113 - -
Spst4g02371 851 FunFam Heat shock 70 kDa protein 4 1 78 - -
Spst4g02371 851 PANTHER HSC70CB, ISOFORM G-RELATED 1 842 - -
Spst4g02371 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 695 IPR029048 -
Spst4g02371 851 Gene3D - 5 374 - -
Spst4g02371 851 PRINTS 70kDa heat shock protein signature 140 160 - -
Spst4g02371 851 PRINTS 70kDa heat shock protein signature 2 15 - -
Spst4g02371 851 PRINTS 70kDa heat shock protein signature 30 42 - -
Spst4g02371 851 PRINTS 70kDa heat shock protein signature 332 348 - -
Spst4g02371 851 PRINTS 70kDa heat shock protein signature 363 383 - -
Spst4g02371 851 FunFam Heat shock 70 kDa protein 4 230 313 - -
Spst4g02371 851 FunFam Heat shock 70 kDa protein 4 38 113 - -
Spst4g02371 851 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02371 Spst-Chr4 64265789 64271346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02371 4 405 Calmodulin-binding Proteins AT1G16030 36.543 2.79e-81 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02371 K09489 - gmx:100780156 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02371 4 64265789 64271346 Spst4g02371 4 64265789 64271346 ECH
Spst5g00157 5 1495395 1500277 Spst4g02371 4 64265789 64271346 PCT