Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02370 ATGTCAAAGAGGATGTCAAAAACCCTTCGAAATTACATCTCCAAGATCAAACCTTCCCAACGTTCCATGATTCAACTAGCCTCCAAGAAATGGGTCCTCAAAGGGTGCAAGCATCCTAGGACTCCTTCTCTTGATATGGACAAAAAGAAAAACATCGTTGTTGCCACCAACGCCAAGGACGACGAAGCCATGTTAGCAGACATTGACCGTTTTCTTGTCGAGAATTTCAAGAATCTATTCCTCGACGATGGTGAAGAAACCACCGGCAACAATCAATCCAAAGAAAAAGACTCTCTCAAACTAGACTCTATCAGATTTGACTCGTCCACAAGGTTCGATGAGTCGCCACTGAACCTCTTCACAGACACAACCACCGAAGCAGGATCCAGTTGGGCTATGTCTGAGAGAGAGGGTGTGGAGGAGCAAACGCCGGTTCCAAGTGACTGCTTGGTGGTGTTGGCCAACTCCATCAGACCCAATGAGGATTTCCGCCGATCCATGGAGGCCATGGTGGAAGCAAGATTGAAGAAGTGTGGAAAGGTGGATTGGGACTTCATGCATGACCTTTTGTTCTGTCACATGAATCTGAATCAGAAGAAGTGGCACAAGTTCATTCTCAGCGCCTTCGTGGACGTGGCCACCACCATGTGCCACCCGCCTGAGATTGCTCCGGAGAAGCCCCTGCCGCCGCGGAGCGTTCGGACTGTTAGGATCGGAAGGGAGGTGCGGAAGAAGACAAAGGAAGCAGTCACCTTGGAATTTGGGTCGTCCTAA 774 0.4948 MSKRMSKTLRNYISKIKPSQRSMIQLASKKWVLKGCKHPRTPSLDMDKKKNIVVATNAKDDEAMLADIDRFLVENFKNLFLDDGEETTGNNQSKEKDSLKLDSIRFDSSTRFDESPLNLFTDTTTEAGSSWAMSEREGVEEQTPVPSDCLVVLANSIRPNEDFRRSMEAMVEARLKKCGKVDWDFMHDLLFCHMNLNQKKWHKFILSAFVDVATTMCHPPEIAPEKPLPPRSVRTVRIGREVRKKTKEAVTLEFGSS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02370 257 NCBIfam uncharacterized plant-specific domain TIGR01568 152 214 IPR006458 -
Spst4g02370 257 ProSiteProfiles OVATE domain profile. 152 215 IPR006458 -
Spst4g02370 257 Pfam Transcriptional repressor, ovate 159 215 IPR006458 -
Spst4g02370 257 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 64 213 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02370 Spst-Chr4 64261526 64262453 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst4g02370 Ovate 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02370 - - gmx:100777653 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02370 4 64261526 64262453 Spst4g02370 4 64261526 64262453 ECH
Spst5g00160 5 1515133 1515987 Spst4g02370 4 64261526 64262453 PCT