Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02361 ATGAACAGACAGGGGCAGAGATCCGCTGCGATGGGGGTGCACCATAACCGCCAGCACTCCGACAACTATCTCGACGCTTCTTCCAAGTGGTTTAACTCTTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTTGTACGGTGGTGGAGGCAGAATGTACCGGAACAACGTGCAGAAGAGTTTGAATGAGTATTGTATGGATCCGTTGACGCCTCCTCGTAGTTTCGGCGTTAAGAAAAACGGCAACGGTAACGGTGAGGAGGATGATTCTCCTCTCGATTTCAGTCCTGGCCTCTTGGATCTTCATTCGTTCGATACAGAGCTTCTTCCTCAGATTCCGTCCTCGACCGCGTATGATTCCGAGCCTTACATATTCGGCAAACAAACTGTAAGAGCTCGTGCTACTGATAACAACGTCTCCAATAGTCTAGCTGCAGCGGAGAATGTGAAACCTAGCAATGTGGCTAAGATTAAAGTTGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGATAGCTAAGCACGAGGAGGATATTATAGATACAGTTTCGAATTCTTTAACAGTGCACGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTTGAGAAGCATGAATTTGTTTTTGATGCTGTTTTGGATGAAGAGGTTACGAATGATGAGGTGTATCGTGAAACGGTGGAGCCCATAGTTCCAATAATATTTCAACGCACAAAGGCAACTTGCTTTGCGTATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCTCTGCCTCTTAAAGCATCAAGGGACATCTTGAGATTGATGCATCAAACCTACAGGAATCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTCTGCATTGTTGGTTTGCAAGAGTACCGAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCAACAAGAAGTACTGGAACCACAGGTGCAAATGAGGAGTCATCACGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGATCAGTTGATGGAAATGTATCCAAGCCTCTGCGTGTTGTTGGGAAACTCTCCTTTATAGATCTTGCTGGAAGTGAGCGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATTAATAAGAGCTTGCTCGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTAAGGGATTCATTTGTCGGTGATTCCCGCACTGTTATGATATCATGCATATCACCAAGTTCCGGTTCATGTGAACATACTCTGAATACATTACGATATGCTGACAGGGTAAAAAGCTTATCCAAAGGGAACAATTCTAAGAAGGATGTTTTATCTTCAAATATCAACCTTAAAGAATCAATTACTATTCCCTTGTCTTCTGTTAATACATATGCCTATGAGGATCGTGCAGCTGATAGATGGCCTGAAGAAAACGACGTGGATGAATTTAGTCCTACTGAAGATTACTATGAACAGGTGAAACCATCATGTAAGAAAAATGGAAAGATAGAGCTATATGGTGCAACAGATGACAAATTTAAGAAACCCCCCAATGGCCAGATTAAATTGAAGGACATCCCGAAAGTTGAATATAAAAAAATACATTCAGATGATGATTTGAATGCCCTCCTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAACATTGTTCGAGAGGAAATGAACCTCTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAACAAAACTAAATGCCCTTCTGTCTCAGAAGGCAGCCGGCATCATGCAGTTACAAACCCGTCTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAACGTTTTCGCTTCATCTGCTGGTTACTAA 2022 0.4228 MNRQGQRSAAMGVHHNRQHSDNYLDASSKWFNSSSNHIPPLQDYNLYGGGGRMYRNNVQKSLNEYCMDPLTPPRSFGVKKNGNGNGEEDDSPLDFSPGLLDLHSFDTELLPQIPSSTAYDSEPYIFGKQTVRARATDNNVSNSLAAAENVKPSNVAKIKVVVRKRPLNKKEIAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLDEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHQTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPLRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNINLKESITIPLSSVNTYAYEDRAADRWPEENDVDEFSPTEDYYEQVKPSCKKNGKIELYGATDDKFKKPPNGQIKLKDIPKVEYKKIHSDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYITKLNALLSQKAAGIMQLQTRLAHFQKRLKEHNVFASSAGY 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02361 673 Pfam Kinesin motor domain 163 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 SMART kinesin_4 155 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 FunFam Kinesin-like protein 136 483 - -
Spst4g02361 673 ProSitePatterns Kinesin motor domain signature. 379 390 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst4g02361 673 PRINTS Kinesin heavy chain signature 430 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 PRINTS Kinesin heavy chain signature 380 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 PRINTS Kinesin heavy chain signature 237 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 ProSiteProfiles Kinesin motor domain profile. 157 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst4g02361 673 MobiDBLite consensus disorder prediction 72 93 - -
Spst4g02361 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 480 IPR027417 -
Spst4g02361 673 Gene3D Kinesin motor domain 130 483 IPR036961 -
Spst4g02361 673 PANTHER KINESIN-RELATED PROTEIN 6 539 667 IPR027640 GO:0003777|GO:0007018
Spst4g02361 673 CDD KISc_KIF2_like 157 478 - -
Spst4g02361 673 Coils Coil 591 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02361 Spst-Chr4 64214567 64219036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02361 156 528 Calmodulin-binding Proteins AT5G65930 32.376 1.10e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02361 K10393 - gmx:100802651 1217.99