Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02344 ATGTCAATCCTTAACATATATGGTATACATGTTCATGGGCTTTTCAATGGCTTAATGGCCCCTCTCTATGTGGGTTCCACGGTTGAATTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGTGAATCATATCCAACTGATGGTTCTAAGGCTGATGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGATGCTTCAGCGTCTGCTGCAAGTAACTTACGTCTTATGATGTGTGGGTCCTCTGCACTTCCGCTACCTGTTATGCACGAATGGGAAGCCATCACTGGCCATCGCCTGTTGGAACGATATGGTATGACTGAATTTGTTATGGCATTGTCGAATCCAGTGAAAGGTGAGCGCAAGCCAGGAACTGTTGGCAAACCATTTCCTGGTATACAGGTGAAGATTGTTGCAGACGAAGAGGGTGAGAATGGCAACACGGGAATGGGTGAACTTTGCGTTAAAAGCCCGTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACTAAGGAATCATTTACTGAGGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTACATCATTTTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTATAAACTTTCTGCATTAGAAATTGAATCAGTTATCATAGAGGCAAGGATGAAGGATGAATATTCACAATCAGAACATTTTTTGCAGCATCCAGCAGTCTCAGAATGTTGCGTTTTAGGATTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCATTGTGCCACATGCTGATGTTAAACGGAAGCGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAACTAATCGTGTGGGACGAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAACTGCTGGTTTCTGAACAGTGA 1053 0.4245 MSILNIYGIHVHGLFNGLMAPLYVGSTVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYHAMDPELQDASASAASNLRLMMCGSSALPLPVMHEWEAITGHRLLERYGMTEFVMALSNPVKGERKPGTVGKPFPGIQVKIVADEEGENGNTGMGELCVKSPSLFKEYWKLPEVTKESFTEDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEARMKDEYSQSEHFLQHPAVSECCVLGLPDKDYGEIVGAIIVPHADVKRKRDQESKPVLSLEELSTWAKDKIAPYKIPTQLIVWDELPRNAMGKVNKKELKKLLVSEQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02344 350 CDD MCS 10 344 - -
Spst4g02344 350 PANTHER ACYL-COA SYNTHETASE 10 344 - -
Spst4g02344 350 SUPERFAMILY Acetyl-CoA synthetase-like 10 347 - -
Spst4g02344 350 Gene3D - 2 219 IPR042099 -
Spst4g02344 350 Pfam AMP-binding enzyme 10 225 IPR000873 -
Spst4g02344 350 Gene3D - 223 350 IPR045851 -
Spst4g02344 350 Pfam AMP-binding enzyme C-terminal domain 257 336 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02344 Spst-Chr4 64116635 64120066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02344 10 349 Monolignol Biosynthesis Gene Families AT4G19010 25.937 3.86e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02344 K18660 - gmx:100813324 597.43