Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02335 ATGTCTACACCCTTAGAACATGATTACATAGGCTTAGCAGAGACTCCATACATGGATAAAAGTTGTGATAAGATATCCTCTTCAGTTTCCTCCAACCTCTCCTCTGAGGATGAGAACAGTTCATCTCTGAACTTCAAGGAGACAGAGCTGAGGCTTTGCCTGCCCGGTTGTGAGTCTCCTGAGAACAAATCAGAAGCTGGAGGGATCTCTCTTTTTGGCAAGGATTTGCAGAATAATGGCTATTCTGCTTCTTCAACCCCTTTCAAGAACCTCAAGAGGGGTTTCTCTGATGCCATTAGCTCCTCCTCTTCTTCTTCTGGGAAATGGATTTTCTCAGCCAGTGATTCAACTGAGGATGATCTGAGAAATGGTGCTAATACCTCTGCACTATGCAACAAAGAGGTTGGTTTGGTTCCTCACTCTGAGAAGCCAGCTCATGTTGCTGCAACAATTGACCATGCTACTCCTTCTGCAAAAGCACAAGTTGTGGGGTGGCCACCAATTCGATCTTTTCGAAAGAACACGATGGCCTATAATTTGGCAAAAAGCAACACTGAAGCTGAGGAGAAACCAGGAGTTGGATGTCTTTATGTTAAGGTCAGCATGGATGGTGCCCCGTATCTCAGAAAGGTTGATCTGAAAACCCACAGCAACTATATTGAACTTTCTTCTGCTCTTGAGAAAATGTTCAGCTGCTTTACCATTGGCCAATGCAGTTCACGTGGAGTTGCAGGAAAAGTGGGATTGAGTGAGAGAGCTTTCAGGGATCTTGTTGATGGCTCTGAATATGTTCTTACATATGAAGATAAGGATGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGGAGATGTTCACTGAGTCATGTAAGAAACTAAGAATAATGAAAGGCTCTGAGGCAATTGGACTGGGGTCCAAGGGCAATGGAAAAATCTAG 936 0.4444 MSTPLEHDYIGLAETPYMDKSCDKISSSVSSNLSSEDENSSSLNFKETELRLCLPGCESPENKSEAGGISLFGKDLQNNGYSASSTPFKNLKRGFSDAISSSSSSSGKWIFSASDSTEDDLRNGANTSALCNKEVGLVPHSEKPAHVAATIDHATPSAKAQVVGWPPIRSFRKNTMAYNLAKSNTEAEEKPGVGCLYVKVSMDGAPYLRKVDLKTHSNYIELSSALEKMFSCFTIGQCSSRGVAGKVGLSERAFRDLVDGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKKLRIMKGSEAIGLGSKGNGKI 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02335 311 FunFam Auxin-responsive protein 190 307 - -
Spst4g02335 311 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 302 IPR003311 GO:0005634|GO:0006355
Spst4g02335 311 Pfam AUX/IAA family 47 305 IPR033389 -
Spst4g02335 311 SUPERFAMILY CAD & PB1 domains 195 296 - -
Spst4g02335 311 ProSiteProfiles PB1 domain profile. 195 297 IPR000270 GO:0005515
Spst4g02335 311 Gene3D - 191 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02335 Spst-Chr4 64052127 64054159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02335 183 306 B3 DNA Binding Superfamily AT2G46530 31.200 5.24e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Spst4g02335 AUX_IAA 5.7e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02335 K14484 - gmx:100795203 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02335 4 64052127 64054159 Spst4g02335 4 64052127 64054159 ECH