Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02328 ATGGCTACCCTTTTGAGCGTGCTCTATGTTGTCTTGGCTGTGATGAATAGCCCCGTCAAAATAGCTGCTAGGGAATTCAGAGTGGGTGGTGACTTGGGTTGGCATGAACCTGCCCCCAATGACACTGCATTTTATAATCAATGGGCTTCAATCAACAGGTTTCAAGTTGGTGACTCTTTAGTTTTTGAGTACCAGAATGATTCAGTTGTGATTGTGGAGAGATGGGAATACTTTCACTGTGACTCAACCAGCCCCATCAACATGTTTGACGATGGGAACAGCACAGTGATTCTTGACAGCCCTGGGATGTTCTACTTCATCAGTGGAACTGAAGATCGTTGCCAGAAAGGGGAGAAATTGATTGTAGAAGTCATGTCACCACACCCAATTACAAAGTCTCCACCCTCCATTGCTTCAATTCCACCACAAGCTTTCCCACCATCGCCTCCTTCTCATAGCCATGGCTCAAGGGTTTCTGTGCACAATTGTGATGTTTTAAACAGCCAAGACGATTATCATCATGTGACATGTTCGATAAAACCATCTATTGTTTCCGATTTTTTTGAGGAAGACACACGATTAAGCCACATAAGGAAGGGGGTTGAAGATGAATAG 615 0.4423 MATLLSVLYVVLAVMNSPVKIAAREFRVGGDLGWHEPAPNDTAFYNQWASINRFQVGDSLVFEYQNDSVVIVERWEYFHCDSTSPINMFDDGNSTVILDSPGMFYFISGTEDRCQKGEKLIVEVMSPHPITKSPPSIASIPPQAFPPSPPSHSHGSRVSVHNCDVLNSQDDYHHVTCSIKPSIVSDFFEEDTRLSHIRKGVEDE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02328 204 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Spst4g02328 204 PANTHER BLUE COPPER PROTEIN 22 135 IPR039391 GO:0009055
Spst4g02328 204 Pfam Plastocyanin-like domain 41 117 IPR003245 GO:0009055
Spst4g02328 204 Gene3D - 22 128 IPR008972 -
Spst4g02328 204 CDD OsENODL1_like 24 125 IPR041846 -
Spst4g02328 204 MobiDBLite consensus disorder prediction 137 158 - -
Spst4g02328 204 FunFam Early nodulin-like protein 1 23 129 - -
Spst4g02328 204 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02328 Spst-Chr4 63997702 64003326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02328 1 146 Phytocyanin Superfamily AT1G79800 45.205 1.94e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02328 - - vun:114166188 228.024