Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02321 ATGCCGGTGCTGCGTAACGGAGCGCGCAGGGGCCGGGGAGCAGCGAAGCAGCAGGCGCGGCAGCAGGTTCCAGTGGCGGAAGGGGAGGCGATTGCGACGAGGACCCGAAGGCGGCGGGCGGCGGCGGCGGCAGCAGCAGTGCCGAAGAGTAATAACAACAACAACGACAATAATAATAACAAGCAGCAACAGCAGCATCAGCCGGAGCAGGTGCTGGTGGTAAATGAAAACTTAGTTGTTGCGGCGAAGGAAGAAGAGAATCGGGGATTGGGGGAAGGTGTTGGTGCGGGTGGAGCGCAGAGGGAAGAGGTAGGGGAGAAAGAGATGGTTGGAAATGACAGTGGAGGTCGGAGCAATGATAAGGCCAATGCTGGTGAAGATGACGCCAATACTCCTCAGGTTCCTCAGAAGATTCAAGTTAGTAATTCACCTTGTTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAGGTATATCTTGGACGACGTTGTACTGGTCATTTGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAACTTGAGCATAGAACTAGTAAAGGGTGTACGTATGGACCTCCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCATGGTGTGCCACAAGTACACTATAAGGGCCGGCAGGGTGACTATTATGTCATGGTTATGGATATACTGGGACCTAGCCTGTGGGATGTTTGGAATAATAACTCTCACTCCATGTCCTCTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGGTATGTGCACGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACGCCTGATGAGAAAAAATTGTTCCTTGTAGATCTTGGATTAGCTACTAAGTGGAGGGATATTACAACAGGCTTACATGTTGAATATGACCAAAGGCCAGATGTTTTTAGAGGCACAGTCCGCTATGCTAGTGTGCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACATTGATTTTTCTTCTCCGAGGTCGCCTTCCTTGGCAGGGATTCCAGGGAGAAAACAAAGGATTTCTGGTTTGCAAGAAGAAGATGGGAACCTCTCCAGAGATTCTTTGCTGCTTTTGTCCCCAACCTTTTAAGCAGTTTGTTGAACATGTTGTGAACTTAAAGTATGATGAAGAACCTAATTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGTCTTAACCCAGATATTAGACCAATTAATACAGATGGTGCACAAAAGCTCATTGGTCATAAGAGAGGCCGGTTGGCCATGGAAGAACAGGACGATGAACAACCAAAAAAGAAGATCCGTATTGGTTTGCCAGCATCCCAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATGCAAGGTTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTGTATATTAGCAGTGTTGCTTCATGTCAGAACGTATGGGCATTAATCATGGATGCAGGGACAGGTTTCGCTGGCCAAGTTTACGAACTCTCACCCTTTTTTCTCCATAAGGAATGGATCGTGGAGCAATGGGAACTAGGCTACTACATCAGCGCAATTGCTGGAGCTGCAAATGGGAGCTCGCTAGTAGTAATGTCTAAGGGCACACAGTTTGTGCAGCAATCGTACAAAGTTAGTGATTCATTTCCTTTCAAGTGGATTAACAAAAAGTGGAGGGAGGGATTTTACGTGACTTCAATGGCCACCTCAGGACCGAGATGGGGAGTGGTCATGTCTCGTGGTGCTGGATATTCAGACCAGGTGATTGAACTAGACTTTCTGTATCCTAGTGAGGGGATTCACAAGCGATGGGATAGCGGATATCGAATCACAGCCACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCTTGAGTGTACCAAGGAGGAAGCCTTCAGATGAAACTCAGGAAACACTCAGGACTTCTGCTTTTCCAAGTACACATGTCAAGGAGAAGTGGGCTAAGAACCTCTACATTGCTTCTATTTGCTACGGACGTACAGTTTCTTGA 2130 0.4662 MPVLRNGARRGRGAAKQQARQQVPVAEGEAIATRTRRRRAAAAAAAVPKSNNNNNDNNNNKQQQQHQPEQVLVVNENLVVAAKEEENRGLGEGVGAGGAQREEVGEKEMVGNDSGGRSNDKANAGEDDANTPQVPQKIQVSNSPCYKVERKLGKGGFGQVYLGRRCTGHLNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDILGPSLWDVWNNNSHSMSSEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDITTGLHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEILCCFCPQPFKQFVEHVVNLKYDEEPNYAKYISLFDGIVGLNPDIRPINTDGAQKLIGHKRGRLAMEEQDDEQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDARLSQHIEKGNEDGLYISSVASCQNVWALIMDAGTGFAGQVYELSPFFLHKEWIVEQWELGYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGPRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITATAATWDQAAFVLSVPRRKPSDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02321 709 MobiDBLite consensus disorder prediction 1 69 - -
Spst4g02321 709 ProSiteProfiles Protein kinase domain profile. 146 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02321 709 CDD STKc_CK1 146 421 - -
Spst4g02321 709 SUPERFAMILY Protein kinase-like (PK-like) 145 423 IPR011009 -
Spst4g02321 709 FunFam casein kinase 1-like protein HD16 119 465 - -
Spst4g02321 709 MobiDBLite consensus disorder prediction 47 69 - -
Spst4g02321 709 MobiDBLite consensus disorder prediction 84 136 - -
Spst4g02321 709 PANTHER CASEIN KINASE-RELATED 145 679 - -
Spst4g02321 709 ProSitePatterns Protein kinases ATP-binding region signature. 152 184 IPR017441 GO:0005524
Spst4g02321 709 SMART serkin_6 146 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02321 709 Gene3D Transferase(Phosphotransferase) domain 1 111 465 - -
Spst4g02321 709 MobiDBLite consensus disorder prediction 101 124 - -
Spst4g02321 709 Pfam Protein kinase domain 146 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02321 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02321 Spst-Chr4 63951370 63956773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02321 264 421 MAP Kinase Kinase Kinase AT5G50180 27.108 5.30e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Spst4g02321 Pkinase 5.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02321 - - gmx:100799630 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02321 4 63951370 63956773 Spst4g02321 4 63951370 63956773 ECH