Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02314 ATGGCCTTCAAGCCTGAGCCAAACCAAACGCCTGCTCTGATTCAGAGCATGTTTGATGTGTTGCCTGGCGACATCACAGTTGAAGGCAACGGGTGGGGTTACATGTTCATAAGGAAGAATTGTTCTTGCGCTGCAGGTATCAAGAAATACGTGTCAAACACCACTTTCACTGTGAAATCTAATGAGGGGTTGGTGTATGACGTGGTGATGGATGCCTATGATGGCCTTGCTTTCCTTCCCAACACCACCAGGAGGGCCAGGAATGGTGCTGTTGTGTCTCTGAGGTTGTTTTGTGGCTGCTCCAGTGGGTTGTGGAACTATATGGTCAGCTACGTGATGAGAGATGGGGATAGTGTCGAATCCTTGGCAAGCAGGTTTGGGGTTAGCATGGATAGCATTGAGAGTGTGAATGGCATTGGTAATCCGGATAATGTCACTGATGTCAGAGTTGGGGCTGTTGAGGGGGCTTATGTAGTTGGGATTTGGGACAAGCGATGGGATATGACAGTGGTTTTTGAGAATTTTCCTGGTGATCCTTATCCACTGATTAATGCTGCTCCACCAGTTCCTGTTCCTTCGCCATCCTTTGATAATTTTTCAGCTGATGGAGTCAACCATAAGGCTCATGTACCCTACGGATGGATCATTGGGGGCCTAGGAGTTGGTCTTCTTCTAATAATATCAACTGTAATTCTCTGTGTTTGTCTGAGATCATCAAATTGTTTTGTTGATGATGCCAGAACTCACGAGAAAGATGCTGAGCGCAAGATTTCACATAAATTCCATATTCTAAGGAACCCAAGTTTTTTCTGTGGTTCTGGAAGGTACATATGTGGCAAGCATGTTGAACAGCAGAAGCAAACAGATGCTGAATCCACTCTTGGGCCTGACGTATTTGAAATGGATAAGCCTGTTGTTTTTACATATGAAGAGATTTTCTCCACATCTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGAACTTATGGATCTGTTTATTATAGCCTCCTTCGTGATCAGGTTTTTGGCCATATACTTGAAGAGTTGAAGTTGGAAGTTGCTATTAAAAGAATGACTGCTACTAAAACAAAAGAATTTATGTCAGAGATGAAAGTTTTGTGTAAGGTTCATCATGCTAATCTGGTAGAATTAATTGGCTATGCAGCTAGTCACGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTTAGAAGCCATTTGCATGATCCTCAAAGTAAGGGTTCATTTGATTTGGTATACATATGTGGAAGGGGTCATTCTCCACTTTCTTGGATCATGAGGGTGCAGATTGCGCTTGATGCTGCTCGGGGTCTTGAATACATACACGAGCACACAAAAACTCATTATGTACACCGTGATATCAAGACCAGTAACATATTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAGCAAATGAGGGAGAAATTTCAACTACCAAAGTTGTTGGTACATACGGATATCTTGCCCCAGAATATTTAAGTGAGGGTCTTGCGACAACTAAAAGCGATGTCTATGCATTTGGTGTTGTCCTTTTTGAGATTATATCAGGAAAGGAGGCCATCATTCGATCAGAAGGCACGACGACAAAAAATTCTGAAAGACGTTCACTGGCATCTATAATGCTGGGAGTTCTTCGGAATTCACCTGATTCCATGAGCATGTCAAGCTTGAGAGATTATATTGATCCAAATATGATGGATTTGTATCCCCATGATTGTGTATTCAAGATGGCCACGCTGGCAAAGCAATGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATTTCCCTCTCACAGATTCTCCTTTCTTCTGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 1956 0.4279 MAFKPEPNQTPALIQSMFDVLPGDITVEGNGWGYMFIRKNCSCAAGIKKYVSNTTFTVKSNEGLVYDVVMDAYDGLAFLPNTTRRARNGAVVSLRLFCGCSSGLWNYMVSYVMRDGDSVESLASRFGVSMDSIESVNGIGNPDNVTDVRVGAVEGAYVVGIWDKRWDMTVVFENFPGDPYPLINAAPPVPVPSPSFDNFSADGVNHKAHVPYGWIIGGLGVGLLLIISTVILCVCLRSSNCFVDDARTHEKDAERKISHKFHILRNPSFFCGSGRYICGKHVEQQKQTDAESTLGPDVFEMDKPVVFTYEEIFSTSDGFSDSNLLGHGTYGSVYYSLLRDQVFGHILEELKLEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGSLRSHLHDPQSKGSFDLVYICGRGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTKVVGTYGYLAPEYLSEGLATTKSDVYAFGVVLFEIISGKEAIIRSEGTTTKNSERRSLASIMLGVLRNSPDSMSMSSLRDYIDPNMMDLYPHDCVFKMATLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02314 651 ProSiteProfiles Protein kinase domain profile. 319 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02314 651 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 37 645 IPR044812 GO:0019199|GO:0045087
Spst4g02314 651 Pfam LysM domain 111 143 IPR018392 -
Spst4g02314 651 ProSiteProfiles LysM domain profile. 109 153 IPR018392 -
Spst4g02314 651 FunFam PTI1-like tyrosine-protein kinase 3 402 637 - -
Spst4g02314 651 SMART serkin_6 319 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02314 651 Pfam Protein tyrosine and serine/threonine kinase 323 621 IPR001245 GO:0004672|GO:0006468
Spst4g02314 651 ProSitePatterns Protein kinases ATP-binding region signature. 325 357 IPR017441 GO:0005524
Spst4g02314 651 Gene3D LysM domain 106 153 IPR036779 -
Spst4g02314 651 SUPERFAMILY Protein kinase-like (PK-like) 299 623 IPR011009 -
Spst4g02314 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Spst4g02314 651 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Spst4g02314 651 Gene3D Transferase(Phosphotransferase) domain 1 403 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02314 Spst-Chr4 63881807 63889161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02314 1 651 Receptor kinase-like Gene Family AT1G51940 63.964 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst4g02314 PK_Tyr_Ser-Thr 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02314 - - gmx:100796989 1060.83