Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02297 ATGCACATGCTCCTCCCTCATGCTCGCACAAAATCTCAACTACTTAGCTCCACCATACAGAAAAGCATTAAGATGAACATTGGAGCTCTTGTTCCACTCTTTGCATTTTCCTTTCTTAGTTGTGTGCATGCACAAGACAGCACCACCCTTGTGCCTGCAATCATAACATTTGGTGATTCTGCTGTGGATGTAGGGAATAATGACTATCTTCCCACTATTTTCAAGGCTAATTACCCTCCCTATGGGAGAGACTTTGCTAACCACCAACCTACTGGGAGGTTTTGCAATGGAAAATTAGCTACTGATATCACTGGTAAAGCATCAAACTTGCTCCTACTTAGATTAAATGCTGACACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTACTTCAGGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGTAGTAAAAAAGCAGCCGCAATTATCAAGGATTCATTGTACGTGCTCAGTGCTGGCAGCAGCGACTTTGTGCAAAATTATTACGTGAATCCTTGGATCAACAAAGTATACACTCCTGACCAGTATTCTTCCTTCTTAGTTGGTGTATTCTCAGGTTTTGTGAAGGACTTGTATGGATTGGGAGCCAGGAAACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATAAACTCTGATGCCCAAGCATTTAACAAGAAGATCAGCTCAGCTGCAGCAAATCTTCAAAAGCAACTTCCTGGTCTCAAGATTGCAGTTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTCGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTAGAGACAACATCCTTGTTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACCCAGTATGTGTTTTGGGATAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATGCATTAATTTTAGAAGGCATAAGTCTTATCACATAA 1167 0.425 MHMLLPHARTKSQLLSSTIQKSIKMNIGALVPLFAFSFLSCVHAQDSTTLVPAIITFGDSAVDVGNNDYLPTIFKANYPPYGRDFANHQPTGRFCNGKLATDITGKASNLLLLRLNADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAAILNHAIPLSQQLSYFREYQGKLAKVAGSKKAAAIIKDSLYVLSAGSSDFVQNYYVNPWINKVYTPDQYSSFLVGVFSGFVKDLYGLGARKLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKISSAAANLQKQLPGLKIAVFDIYKPLYDLVQSPSKFGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILEGISLIT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02297 388 Pfam GDSL-like Lipase/Acylhydrolase 54 378 IPR001087 GO:0016788
Spst4g02297 388 FunFam GDSL esterase/lipase APG 43 384 - -
Spst4g02297 388 Gene3D SGNH hydrolase 41 382 IPR036514 -
Spst4g02297 388 PANTHER GDSL ESTERASE/LIPASE EXL3 40 379 - -
Spst4g02297 388 CDD SGNH_plant_lipase_like 52 380 IPR035669 -
Spst4g02297 388 SUPERFAMILY SGNH hydrolase 149 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02297 Spst-Chr4 63708465 63710549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02297 47 377 Acyl Lipid Metabolism Gene Families AT4G10950 30.931 5.49e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02297 - - vun:114167332 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02297 4 63708465 63710549 Spst4g02297 4 63708465 63710549 ECH
Spst5g00233 5 2052485 2053915 Spst4g02297 4 63708465 63710549 PCT