Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02295 ATGGCGACGGCGCCGGGAAACCAAATGCTGGAGGGAGGAGGAGCGCCGCCGCCTCCGGGGACTGACATGACCGGAATATGCTTCCGAGACCAGCTCTGGCTTAACAGCTTCCCTCTCGACCGCAACCTGGTCTTCGATTACTTTGCCCTTTCCCCTTTCTACGATTGGACTTGCAACAACGAGCAACTCCGGATGCGCTCCGTTCACCCCCTTGACATCTCTCAACTCTCGAAAATGACGGGGATGGAGTATATGCTCAGCGAAGTTATGGAGCCGCACCTGTTCGTTATTCGCAAGCAGAAGAGAGATAGCCCCGAAAAGGTTACGCCTATGCTCGCCTACTACGTCCTCGATGGTTCCATTTACCAGGCTCCGCAACTGTGCAATGTTTTTGCAGCCAGAATTGGAAGGGCCCTTTATTACATAGAGAAGGCATTTACTACAGCTGCCTCAAAGTTGGAGAAAATTGGATATGCTGGGTCAGTTGATTCTGAAAATGAGACTGCATTGGTGGAGTCAAAGACTGCTAAGGAGACAATTGACATAAAGGAAGTTAAGCGTGTGGATCATATCCTTGCATCGTTGCAACGCAAGTTACCACCAGCTCCTCCTCCACCACCATTTCCAGAAGGGTATGTTCCGCCTCCAACAGCAGAAGCTGAGAAAGGCACCGAAACCCAGGAAGCAGCAGAAACGCAAGCTCCTACTGCTGATCCCATAATTGACCAAGGACCAGCAAAAAGAATGAAATATTAA 756 0.504 MATAPGNQMLEGGGAPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSPEKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIEKAFTTAASKLEKIGYAGSVDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAKRMKY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02295 251 MobiDBLite consensus disorder prediction 1 21 - -
Spst4g02295 251 MobiDBLite consensus disorder prediction 197 251 - -
Spst4g02295 251 MobiDBLite consensus disorder prediction 198 214 - -
Spst4g02295 251 PANTHER MED-6-RELATED 3 251 IPR007018 GO:0003712|GO:0006357|GO:0016592
Spst4g02295 251 Pfam MED6 mediator sub complex component 26 151 IPR007018 GO:0003712|GO:0006357|GO:0016592
Spst4g02295 251 Gene3D Mediator complex, subunit Med6 20 149 IPR038566 -
Spst4g02295 251 PIRSF MED6_meta/plant 13 251 IPR016820 GO:0003712|GO:0006357|GO:0016592
Spst4g02295 251 FunFam Mediator of RNA polymerase II transcription subunit 6 20 149 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Spst4g02295 Med6 5.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02295 K15128 - gmx:100792248 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02295 4 63694644 63699297 Spst4g02295 4 63694644 63699297 ECH