Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02292 ATGATTCATCAAACAATGGTGGGAATGTTAATGCAGTTTCCTTTTGTATTGTTTGGGGTCCTTAGTGCTTTGGTTCTGATTCAAGCACAGGATCAATCAGGGTTCATTAGCATAGACTGTGGTCTAACTGAGGCTTCAAGCTATTCTGAGAGGACCACAGGCATATTTTACATTTCAGATGACAAATTTATAGATAGTGGTGAAAGTATGAGTATAACACCTGCAGAGAAGGGTATTCATCAACAACAGCTAGCATATGTGAGGAGCTTTCCCAATGGAGTGAGAAACTGTTACAGAATAAACGTGACAAGTGGTACTAAGTACTTAATCCGAGCCACTTTCTTTTATGGAAACTATGATGGTCTCAATAAGCCTCCACAGTTTGATCTTCATCTTGGAGCTAATTTATGGGACACAGTGAGGTTCGACAATGCATCACTCAGCACAATCAAAGAGATCATTTACACTCCCTCCTTGGATTACATAAGTCCATGTCTGGTTAACACAGGAAGTGGGATTCCATTCATTTCAGCTATAGAATTGAGGACTTTGGACAGGAATTCCTATTCCACTGCCTTAGGTGAATCATTGGCATACATCTGGCGATATGATTTTGGTTCCATCACCAACTTAGAGTACAGGTACAAAGATGATGTTTATGATCGCATCTGGGTGCCTCATGGATTTAACAAGTGGACACAGTTAAGCAGCACACTTAATCCAGTTGATCTATTCCAGAATAATTACAAGCCACCAGAAGTTGTCATGAGCACTGCCGCTACACCAATAAGTGCTAGTGTTCCTTTTGAGTTCTATTGGTATTCAGATAATGTGAATGAGAATTTCTACATCTACATGCACTTTAATGAAGTGGAAATGCTGGCAAATAGTAGAACTAGAACATTCAATATCTTCTTGAATGACAAGTTATTCTATGGACCTGTGGCTCCTGAATATCAAACGACATCTACCATTTTTAGTAAAGAAGCAACGACTGGATTCACAAGGTACATACTTTCTCTTGTTAAGACAGAGACTTCTACCCTTCCACCCATCATTAATGCCGTGGAGATTTATAAAGTAATAGATTTTCCACTATCAGAAACTGAACAAGATGATGTTGATGCTATCACAAACATCAAAAGCGCTTATGGGGTGGATAGAAATTGGCAAGGAGATCCATGTCACCCAGTGGCATACATTTGGAAAGGTCTAACTTGTAGATTTCATGGTGATTACACTCCAAGAATCACATCCTTGAATTTGTCTTCTAGTGGCCTGACCGGGCTGATATCATCTTCCATCTCCGAGCTCACTATGTTACGCTACTTGGATTTATCAAACAATCGTTTAAGTGGGCCAGTGCCTGATTTTCTGACACAAATGCAATCACTTGAGGTCTTAAACTTGTTTAATAACAACCTTACTGGTTCAGTTCCCAGAGGACTTATTGATAGATCAAAGGAAGGTTCACTATCATTGAGCTCTTTTGGAAAAGCTCTGACTTATGCTTGTATGAATTATACTAGCTTGGGGCAAAATCCAAATCTTGTATGTGAATCTGCTCCATGCATCCAGCAGACAAATAACCAGCAGCCAGATGATGATGATGATCAAAAGAAGAACAAAAATAATATAGTTATTCCTGTAGTAGCATTTGTTGCTGGGATTTTGGTGCTCCTAATAATTGTTGCAGCAGCTATAATCTATGGCCTTAAAAGGAGAAAACCACATGCATCTGCGAACATTGATGTTGAGACCAATATTCCAAATGGATCACAATTTGAACCCAAGCAACGACAATATACGTTCGACGATCTTGTTAAGATCACCAACAACTTTACCAGAATTCTTGGTAGAGGTGGATTTGGGAATGTTTATCATGGATCTATTGAAGACACTCAAGTAGCTGTTAAGATGCTTTCTCCATCATCAGTACGAGGATACGAACAATTTCTAGCAGAGGCAAGTGGAAAAAGTGGCAGTGCAAAGTTCTTAACGTGGGAAGATAGACTCCAAATAGCATTGGATGCTGCCCAAGGACTTGAATATCTGCATAATGGTTGTAAACCAGCCATAATCCACAGAGATGTGAAGAGTGCAAATATTCTATTAAATGAAAACTTCCAGGCAAAATTGGCTGATTTTGGCCTATCCAAAAGCTTTCCAACAGATGGAGGCACACATTTGTCCACAGTTGTTGCTGGAACTCCCGGATATTTGGATCCAGAGTACAGCTTATCAAGCAGATTGACAAAGAGAAGTGATGTTTACAGCTTTGGAGTTGTTCTTTTGGAGATGGTTACAGGTAAGCCAGCTATATCAAAACCACCTGAGAAGACTCACTTAAGTGATTGGGTTAGCTCCAATCTTTCTAATGGGGATATAAAGAATATTGCTGACTCAAGGTTACAAGAAGATTTTGACATTAACTCAGTATGGAGAGTAATTGAAATAGGAATGGCTTCTGTGTCCACTAGACCTGCCAAAAGGCCAAGTATGAGGGATGTAGTGAACGAACTAAAAGAGTGTTTGACTACAGAATTGGCTCGAAAATATAGTGGTCGTGACACTGAAAGCAATGACTTAATTGAGTTGGCCTCTCTGAATTTCACAACAGAAATTGTTCCCCCAGCCTGA 2640 0.3962 MIHQTMVGMLMQFPFVLFGVLSALVLIQAQDQSGFISIDCGLTEASSYSERTTGIFYISDDKFIDSGESMSITPAEKGIHQQQLAYVRSFPNGVRNCYRINVTSGTKYLIRATFFYGNYDGLNKPPQFDLHLGANLWDTVRFDNASLSTIKEIIYTPSLDYISPCLVNTGSGIPFISAIELRTLDRNSYSTALGESLAYIWRYDFGSITNLEYRYKDDVYDRIWVPHGFNKWTQLSSTLNPVDLFQNNYKPPEVVMSTAATPISASVPFEFYWYSDNVNENFYIYMHFNEVEMLANSRTRTFNIFLNDKLFYGPVAPEYQTTSTIFSKEATTGFTRYILSLVKTETSTLPPIINAVEIYKVIDFPLSETEQDDVDAITNIKSAYGVDRNWQGDPCHPVAYIWKGLTCRFHGDYTPRITSLNLSSSGLTGLISSSISELTMLRYLDLSNNRLSGPVPDFLTQMQSLEVLNLFNNNLTGSVPRGLIDRSKEGSLSLSSFGKALTYACMNYTSLGQNPNLVCESAPCIQQTNNQQPDDDDDQKKNKNNIVIPVVAFVAGILVLLIIVAAAIIYGLKRRKPHASANIDVETNIPNGSQFEPKQRQYTFDDLVKITNNFTRILGRGGFGNVYHGSIEDTQVAVKMLSPSSVRGYEQFLAEASGKSGSAKFLTWEDRLQIALDAAQGLEYLHNGCKPAIIHRDVKSANILLNENFQAKLADFGLSKSFPTDGGTHLSTVVAGTPGYLDPEYSLSSRLTKRSDVYSFGVVLLEMVTGKPAISKPPEKTHLSDWVSSNLSNGDIKNIADSRLQEDFDINSVWRVIEIGMASVSTRPAKRPSMRDVVNELKECLTTELARKYSGRDTESNDLIELASLNFTTEIVPPA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02292 879 Gene3D Transferase(Phosphotransferase) domain 1 655 864 - -
Spst4g02292 879 SMART serkin_6 612 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02292 879 Gene3D Ribonuclease Inhibitor 374 491 IPR032675 -
Spst4g02292 879 Pfam Leucine rich repeat 415 475 IPR001611 GO:0005515
Spst4g02292 879 Pfam Malectin-like domain 38 361 IPR024788 -
Spst4g02292 879 FunFam Leucine-rich repeat receptor-like kinase 372 496 - -
Spst4g02292 879 ProSiteProfiles Protein kinase domain profile. 486 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02292 879 ProSitePatterns Protein kinases ATP-binding region signature. 618 639 IPR017441 GO:0005524
Spst4g02292 879 Pfam Protein kinase domain 669 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02292 879 Gene3D Phosphorylase Kinase; domain 1 572 654 - -
Spst4g02292 879 SUPERFAMILY Protein kinase-like (PK-like) 593 841 IPR011009 -
Spst4g02292 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Spst4g02292 879 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 853 - -
Spst4g02292 879 SUPERFAMILY L domain-like 378 485 - -
Spst4g02292 879 PANTHER OS07G0107800 PROTEIN-RELATED 36 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02292 Spst-Chr4 63682337 63686765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02292 13 879 Receptor kinase-like Gene Family AT1G51800 45.553 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst4g02292 Malectin_like 5.7e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02292 - - gmx:100779474 1272.69