Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02284 ATGGCGACAGTTCCAGGGCAGCTCGTGTGGGAGATCGTGAAGAAGAACAACTCCTTTTTGGTGAAACAGTTCGGAAGAGGCACCCAGAGCGTTGAATTCAGCAGAGAGTCCAACAATCTCTACAACCTCAATTCGTTCAAATACTCTGGTTTGGCAAACAAGAAAACTGTTACCGTTCAACCCGTTGGTAAGGATGTGTCTGTGTTGTTGGCTACAACGAAGACCAAGAAGCAAAACAAGCCTGCTGCATTGCTCCACAAATCTGTGATGAAAAAGGAGTTCAGTAGGATGGCAAAGGCTGTTGAAAATCAGGTGGCGGAAAATTACTACAGGCCTGATCTCAAGAAGGCTGCCCTTGCAAGGTTGAGTGTTGTTCACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTGAAGAAGAGGAACAGACAGGCCGTGAAGGTCTCTGGTCAACTGACAGTAGCTGGGCTTTATTGCATCAAAGGACTTGAAACTAGAGTTGGCGCGAGGATTGAGATGGTTGACTGGCTGTCCATGCGTGACCATTACGATGCAATACAAAGTTTCATAATTGGTTTGGTACTCACTGTTCTGGCTGCTGATCACAAAGCAGCCATGTCTGTAAAGAAATCTGCGTCTTTGAATGGTGGCAATGCCATTATCAACCTTAAGGCCCAGAAATCTTCAAGACGGAGGCGTTTTGATCGTGGTTTCTCCTCGGTTGAACTTTCTATGGAGCCAGGGAAGCAGCTGAAGGACATGGATTCCAACAAGTTGAAGGCTGAGATCAAAAGGTGGGCTAAGGCTGTTGCTGCTTATGTGCGCCAAATCAGTGGCCGTTTTGGAAAGACACGTGGCTAA 855 0.4702 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKTVTVQPVGKDVSVLLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVAENYYRPDLKKAALARLSVVHRSLKVAKSGVKKRNRQAVKVSGQLTVAGLYCIKGLETRVGARIEMVDWLSMRDHYDAIQSFIIGLVLTVLAADHKAAMSVKKSASLNGGNAIINLKAQKSSRRRRFDRGFSSVELSMEPGKQLKDMDSNKLKAEIKRWAKAVAAYVRQISGRFGKTRG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02284 284 PANTHER 60S RIBOSOMAL PROTEIN L28 1 147 IPR002672 GO:0003735|GO:0005840|GO:0006412
Spst4g02284 284 FunFam 60S ribosomal protein L28 5 133 - -
Spst4g02284 284 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Spst4g02284 284 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02284 Spst-Chr4 63630195 63633932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02284 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.028 7.46e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02284 K02903 - gmx:100499921 275.018